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We study the problem of learning a node-labeled tree given independent traces from an appropriately defined deletion channel. This problem, tree trace reconstruction, generalizes string trace reconstruction, which corresponds to the tree…

Computational Complexity · Computer Science 2020-09-22 Sami Davies , Miklos Z. Racz , Cyrus Rashtchian

Following Anders and Archer, we say that an unordered rooted labeled forest avoids the pattern $\sigma\in\mathcal{S}_k$ if in each tree, each sequence of labels along the shortest path from the root to a vertex does not contain a…

Combinatorics · Mathematics 2022-11-01 Swapnil Garg , Alan Peng

Let $T$ be a tree on $n$ vertices. We can regard the edges of $T$ as transpositions of the vertex set; their product (in any order) is a cyclic permutation. All possible cyclic permutations arise (each exactly once) if and only if the tree…

Combinatorics · Mathematics 2020-10-29 Peter J. Cameron , Liam Stott

An increasing 1,2-tree is a labeled graph formed by starting with a vertex and then repeatedly attaching a leaf to a vertex or a triangle to an edge, the labeling of the vertices corresponding to the order in which the vertices are added.…

Combinatorics · Mathematics 2025-03-20 Julien Courtiel , Matthieu Dien , Paul Dorbec

Let $\T_{n}$ be the set of rooted labeled trees on $\set{0,...,n}$. A maximal decreasing subtree of a rooted labeled tree is defined by the maximal subtree from the root with all edges being decreasing. In this paper, we study a new…

Combinatorics · Mathematics 2022-03-22 Seunghyun Seo , Heesung Shin

Given a rooted tree and a ranking of its leaves, what is the minimum number of inversions of the leaves that can be attained by ordering the tree? This variation of the problem of counting inversions in arrays originated in mathematical…

Data Structures and Algorithms · Computer Science 2024-07-02 Ivan Hu , Dieter van Melkebeek , Andrew Morgan

A tree $T$ on $2^n$ vertices is called set-sequential if the elements in $V(T)\cup E(T)$ can be labeled with distinct nonzero $(n+1)$-dimensional $01$-vectors such that the vector labeling each edge is the component-wise sum modulo $2$ of…

Combinatorics · Mathematics 2021-11-09 Emily Eckels , Ervin Gyori , Junsheng Liu , Sohaib Nasir

We give a short and direct proof of a remarkable identity that arises in the enumeration of labeled trees with respect to their indegree sequence, where all edges are oriented from the vertex with lower label towards the vertex with higher…

Combinatorics · Mathematics 2016-01-20 Stephan Wagner

In this paper, we provide algorithms to rank and unrank certain degree-restricted classes of Cayley trees (spanning trees of the n-vertex complete graph). Specifically, we consider classes of trees that have a given set of leaves or a fixed…

Combinatorics · Mathematics 2010-09-13 Jeffrey B. Remmel , S. Gill Williamson

The subject of pattern avoiding permutations has its roots in computer science, namely in the problem of sorting a permutation through a stack. A formula for the number of permutations of length n that can be sorted by passing it twice…

Combinatorics · Mathematics 2010-03-26 Anders Claesson , Sergey Kitaev , Einar Steingrimsson

We consider labeled $r$-uniform hypertrees having $n \ge r \ge 2$ vertices. The number of hyperedges in such a hypertree is $m = (n - 1)/(r - 1)$. We show that there are exactly $f(n, r) = \frac{(n-1)! n^{m-1}}{(r-1)!^m m!}$ $r$-uniform…

Combinatorics · Mathematics 2018-12-18 Arjun Pitchanathan , Saswata Shannigrahi

Given an edge-weighted tree $T$ with $n$ leaves, sample the leaves uniformly at random without replacement and let $W_k$, $2 \le k \le n$, be the length of the subtree spanned by the first $k$ leaves. We consider the question, "Can $T$ be…

Combinatorics · Mathematics 2015-06-04 Steven N. Evans , Daniel Lanoue

A {\em leader} of a tree $T$ on $[n]$ is a vertex which has no smaller descendants in $T$. Gessel and Seo showed $$\sum_{T \in \mathcal{T}_n}u^\text{(# of leaders in $T$)} c^\text{(degree of 1 in $T$)}=u P_{n-1}(1,u,cu),$$ which is a…

Combinatorics · Mathematics 2022-03-22 Seunghyun Seo , Heesung Shin

Suppose P is a set of primes, such that for every p in P, every prime factor of p-1 is also in P. If P does not contain all primes, we apply a new sieve method to show that the counting function of P is O(x^{1-c}) for some c>0, where c…

Number Theory · Mathematics 2019-10-22 Kevin Ford

We apply the theory of markov random fields on trees to derive a phase transition in the number of samples needed in order to reconstruct phylogenies. We consider the Cavender-Farris-Neyman model of evolution on trees, where all the inner…

Probability · Mathematics 2007-05-23 Elchanan Mossel

We prove a conjecture of Gy\'arf\'as (1976), which asserts that any family of trees $T_1, \dots, T_{n}$ where each $T_k$ has $k$ vertices packs into $K_n$. We do so by translating the decomposition problem into a labeling problem, namely…

Combinatorics · Mathematics 2024-10-24 Parikshit Chalise , Antwan Clark , Edinah K. Gnang

For any set $\Omega$ of non-negative integers such that $\{0,1\}\subseteq \Omega$ and $\{0,1\}\ne \Omega$, we consider a random $\Omega$-$k$-tree ${\sf G}_{n,k}$ that is uniformly selected from all connected $k$-trees of $(n+k)$ vertices…

Probability · Mathematics 2016-05-18 Michael Drmota , Emma Yu Jin , Benedikt Stufler

We present a new method to count unrooted maps on the sphere up to orientation-preserving homeomorphisms. The principle, called tree-decomposition, is to deform a map into an arborescent structure whose nodes are occupied by constrained…

Combinatorics · Mathematics 2007-05-23 Eric Fusy

Consider a rooted binary tree with n nodes. Assign with the root the abscissa 0, and with the left (resp. right) child of a node of abscissa i the abscissa i-1 (resp. i+1). We prove that the number of binary trees of size n having exactly…

Combinatorics · Mathematics 2025-04-11 Mireille Bousquet-Mélou , Guillaume Chapuy

We revisit the \textsc{$k$-Secluded Tree} problem. Given a vertex-weighted undirected graph $G$, its objective is to find a maximum-weight induced subtree $T$ whose open neighborhood has size at most $k$. We present a fixed-parameter…

Data Structures and Algorithms · Computer Science 2022-06-27 Huib Donkers , Bart M. P. Jansen , Jari J. H. de Kroon