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Given a string $S$ over an alphabet $\Sigma$, the 'string indexing problem' is to preprocess $S$ to subsequently support efficient pattern matching queries, i.e., given a pattern string $P$ report all the occurrences of $P$ in $S$. In this…

Data Structures and Algorithms · Computer Science 2023-01-24 Philip Bille , Johannes Fischer , Inge Li Gørtz , Max Rishøj Pedersen , Tord Joakim Stordalen

We propose algorithms that, given the input string of length $n$ over integer alphabet of size $\sigma$, construct the Burrows-Wheeler transform (BWT), the permuted longest-common-prefix (PLCP) array, and the LZ77 parsing in…

Data Structures and Algorithms · Computer Science 2020-12-09 Dominik Kempa

We consider a sliding window $W$ over a stream of characters from some alphabet of constant size. The user wants to perform deterministic substring matching on the current sliding window content and obtain positions of the matches. We…

Data Structures and Algorithms · Computer Science 2018-09-07 Andrej Brodnik , Matevž Jekovec

Let $S$ be a string of length $n$ over an alphabet $\Sigma$ and let $Q$ be a subset of $\Sigma$ of size $q \geq 2$. The 'co-occurrence problem' is to construct a compact data structure that supports the following query: given an integer $w$…

Data Structures and Algorithms · Computer Science 2022-11-11 Philip Bille , Inge Li Gørtz , Tord Stordalen

Bitmap indexes must be compressed to reduce input/output costs and minimize CPU usage. To accelerate logical operations (AND, OR, XOR) over bitmaps, we use techniques based on run-length encoding (RLE), such as Word-Aligned Hybrid (WAH)…

Databases · Computer Science 2016-08-02 Daniel Lemire , Owen Kaser , Kamel Aouiche

Natural language text corpora are often available as sets of syntactically parsed trees. A wide range of expressive tree queries are possible over such parsed trees that open a new avenue in searching over natural language text. They not…

Databases · Computer Science 2012-08-02 Pirooz Chubak , Davood Rafiei

In this paper, we consider the problem of compressing a trie while supporting the powerful \emph{locate} queries: to return the pre-order identifiers of all nodes reached by a path labeled with a given query pattern. Our result builds on…

Data Structures and Algorithms · Computer Science 2020-12-18 Nicola Prezza

The index selection problem (ISP) is an important problem for accelerating the execution of relational queries, and it has received a lot of attention as a combinatorial knapsack problem in the past. Various solutions to this very hard…

Databases · Computer Science 2017-09-13 Herbert Jordan , Bernhard Scholz , Pavle Subotić

We present the Cuckoo Trie, a fast, memory-efficient ordered index structure. The Cuckoo Trie is designed to have memory-level parallelism -- which a modern out-of-order processor can exploit to execute DRAM accesses in parallel -- without…

Data Structures and Algorithms · Computer Science 2022-01-25 Adar Zeitak , Adam Morrison

We consider the design of adaptive data structures for searching elements of a tree-structured space. We use a natural generalization of the rotation-based online binary search tree model in which the underlying search space is the set of…

Data Structures and Algorithms · Computer Science 2019-08-05 Prosenjit Bose , Jean Cardinal , John Iacono , Grigorios Koumoutsos , Stefan Langerman

In this paper, we consider the minimum spanning tree problem (for short, MSTP) on an arbitrary set of $n$ points of $d$-dimensional space in $l_1$-norm. For this problem, for each fixed $d\geq 2$, there is a known algorithm of the…

Discrete Mathematics · Computer Science 2024-12-12 K. V. Kaymakov , D. S. Malyshev

The Suffix Array is a classic text index enabling on-line pattern matching queries via simple binary search. The main drawback of the Suffix Array is that it takes linear space in the text's length, even if the text itself is extremely…

Data Structures and Algorithms · Computer Science 2025-03-19 Davide Cenzato , Lore Depuydt , Travis Gagie , Sung-Hwan Kim , Giovanni Manzini , Francisco Olivares , Nicola Prezza

Rank and select data structures seek to preprocess a bit vector to quickly answer two kinds of queries: rank(i) gives the number of 1 bits in slots 0 through i, and select(j) gives the first slot s with rank(s) = j. A succinct data…

Data Structures and Algorithms · Computer Science 2024-05-09 Matthew D. Laws , Jocelyn Bliven , Kit Conklin , Elyes Laalai , Samuel McCauley , Zach S. Sturdevant

Recent research found that cloud data warehouses are text-heavy. However, their capabilities for efficiently processing string columns remain limited, relying primarily on techniques like dictionary encoding and prefix-based partition…

Databases · Computer Science 2025-07-15 Mihail Stoian , Johannes Thürauf , Andreas Zimmerer , Alexander van Renen , Andreas Kipf

Existing learned indexes (e.g., RMI, ALEX, PGM) optimize the internal regressor of each node, not the overall structure such as index height, the size of each layer, etc. In this paper, we share our recent findings that we can achieve…

Databases · Computer Science 2022-08-09 Supawit Chockchowwat , Wenjie Liu , Yongjoo Park

In this paper, we introduce zip-tries, which are simple, dynamic, memory-efficient data structures for strings. Zip-tries support search and update operations for $k$-length strings in $\mathcal{O}(k+\log n)$ time in the standard RAM model…

Data Structures and Algorithms · Computer Science 2025-08-21 David Eppstein , Ofek Gila , Michael T. Goodrich , Ryuto Kitagawa

The Binary Search Tree (BST) is average in computer science which supports a compact data structure in memory and oneself even conducts a row of quick algorithms, by which people often apply it in dynamical circumstance. Besides these…

Data Structures and Algorithms · Computer Science 2018-10-05 Yong Tan

The retrieval problem is the problem of associating data with keys in a set. Formally, the data structure must store a function f: U ->{0,1}^r that has specified values on the elements of a given set S, a subset of U, |S|=n, but may have…

Data Structures and Algorithms · Computer Science 2008-03-27 Martin Dietzfelbinger , Rasmus Pagh

We introduce a compressed suffix array representation that, on a text $T$ of length $n$ over an alphabet of size $\sigma$, can be built in $O(n)$ deterministic time, within $O(n\log\sigma)$ bits of working space, and counts the number of…

Data Structures and Algorithms · Computer Science 2017-09-05 J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

Compact and I/O-efficient data representations play an important role in efficient algorithm design, as memory bandwidth and latency can present a significant performance bottleneck, slowing the computation by orders of magnitude. While…

Data Structures and Algorithms · Computer Science 2018-11-19 Tomáš Gavenčiak , Jakub Tětek
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