On Locating Paths in Compressed Tries
Abstract
In this paper, we consider the problem of compressing a trie while supporting the powerful \emph{locate} queries: to return the pre-order identifiers of all nodes reached by a path labeled with a given query pattern. Our result builds on top of the XBWT tree transform of Ferragina et al. [FOCS 2005] and generalizes the \emph{r-index} locate machinery of Gagie et al. [SODA 2018, JACM 2020] based on the run-length encoded Burrows-Wheeler transform (BWT). Our first contribution is to propose a suitable generalization of the run-length BWT to tries. We show that this natural generalization enjoys several of the useful properties of its counterpart on strings: in particular, the transform natively supports counting occurrences of a query pattern on the trie's paths and its size captures the trie's repetitiveness and lower-bounds a natural notion of trie entropy. Our main contribution is a much deeper insight into the combinatorial structure of this object. In detail, we show that a data structure of bits, where is the number of nodes, allows locating the occurrences of a pattern of length in nearly-optimal time, where is the alphabet's size. Our solution consists in sampling nodes that can be used as "anchor points" during the locate process. Once obtained the pre-order identifier of the first pattern occurrence (in co-lexicographic order), we show that a constant number of constant-time jumps between those anchor points lead to the identifier of the next pattern occurrence, thus enabling locating in optimal time per occurrence.
Cite
@article{arxiv.2004.01120,
title = {On Locating Paths in Compressed Tries},
author = {Nicola Prezza},
journal= {arXiv preprint arXiv:2004.01120},
year = {2020}
}
Comments
Improved toehold lemma running time; added more detailed proofs that take care of all border cases in the locate strategy; postprint version to appear in SODA 2020