Related papers: Decomposition of Triply Rooted Trees
The theorem of factorisation forests shows the existence of nested factorisations -- a la Ramsey -- for finite words. This theorem has important applications in semigroup theory, and beyond. The purpose of this paper is to illustrate the…
We present an approach (the biroot method) for nth root approximation that yields closed-form rational functions with coefficients derived from binomial structures, Gaussian functions, or qualifying DAG structures. The method emerges from…
We construct the ordinary irreducible representations of the group of automorphisms of a finite rooted tree and we get a natural parametrization of them. To achieve this goals, we introduce and study the combinatorics of tree compositions,…
A normal network is uniquely determined by the set of phylogenetic trees that it displays. Given a set $\mathcal{P}$ of rooted binary phylogenetic trees, this paper presents a polynomial-time algorithm that reconstructs the unique binary…
The Rabin tree theorem yields an algorithm to solve the satisfiability problem for monadic second-order logic over infinite trees. Here we solve the probabilistic variant of this problem. Namely, we show how to compute the probability that…
Based on decision trees, many fields have arguably made tremendous progress in recent years. In simple words, decision trees use the strategy of "divide-and-conquer" to divide the complex problem on the dependency between input features and…
We revisit the model of the ballistic deposition studied in \cite{bdeposition} and prove several combinatorial properties of the random tree structure formed by the underlying stochastic process. Our results include limit theorems for the…
We develop a general theory of "bisets": sets with two commuting group actions. They naturally encode topological correspondences. Just as van Kampen's theorem decomposes into a graph of groups the fundamental group of a space given with a…
In this paper, we study functions of the roots of a univariate polynomial in which the roots have a given multiplicity structure $\mu$. Traditionally, root functions are studied via the theory of symmetric polynomials; we extend this theory…
To a definable subset of Z_p^n (or to a scheme of finite type over Z_p) one can associate a tree in a natural way. It is known that the corresponding Poincare series P(X) = \sum_i N_i X^i is rational, where N_i is the number of nodes of the…
This paper has a two-fold purpose. First, by considering a reformulation of a deep theorem of G\"ollnitz, we obtain a new weighted partition identity involving the Rogers-Ramanujan partitions, namely, partitions into parts differing by at…
In this note, after recalling a proof of the Macdonald identities for untwisted affine root systems, we derive the Macdonald identities for twisted affine root systems.
The reconstruction of a species phylogeny from genomic data faces two significant hurdles: 1) the trees describing the evolution of each individual gene--i.e., the gene trees--may differ from the species phylogeny and 2) the molecular…
In this paper, we consider decision trees that use both queries based on one attribute each and queries based on hypotheses about values of all attributes. Such decision trees are similar to ones studied in exact learning, where not only…
Unrooted phylogenetic networks are graphs used to represent evolutionary relationships. Accurately reconstructing such networks is of great relevance for evolutionary biology. It has recently been conjectured that all phylogenetic networks…
A rooted tree module (RTM) $M:=M(T,F)$ over a zero-relation algebra $\Lambda:=\mathcal KQ/\langle\rho\rangle$ over a field $\mathcal K$ is given by the data of a quiver morphism $F:T\to Q$ from a rooted tree $T$ (either with a source or a…
Probability estimation is one of the fundamental tasks in statistics and machine learning. However, standard methods for probability estimation on discrete objects do not handle object structure in a satisfactory manner. In this paper, we…
We generalize the concept of ascending and descending runs from permutations to rooted labelled trees and mappings, i.e., functions from the set $\{1, \dots, n\}$ into itself. A combinatorial decomposition of the corresponding functional…
An evolutionary tree (phylogenetic tree) is a binary, rooted, unordered tree that models the evolutionary history of currently living species in which leaves are labeled by species. In this paper, we investigate the problem of finding the…
Recombining trinomial trees are a workhorse for modeling discrete-event systems in option pricing, logistics, and feedback control. Because each node stores a state-dependent quantity, a depth-$D$ tree naively yields $\mathcal{O}(3^{D})$…