English

When is a set of phylogenetic trees displayed by a normal network?

Combinatorics 2024-07-10 v1

Abstract

A normal network is uniquely determined by the set of phylogenetic trees that it displays. Given a set P\mathcal{P} of rooted binary phylogenetic trees, this paper presents a polynomial-time algorithm that reconstructs the unique binary normal network whose set of displayed binary trees is P\mathcal{P}, if such a network exists. Additionally, we show that any two rooted phylogenetic trees can be displayed by a normal network and show that this result does not extend to more than two trees. This is in contrast to tree-child networks where it has been previously shown that any collection of rooted phylogenetic trees can be displayed by a tree-child network. Lastly, we introduce a type of cherry-picking sequence that characterises when a collection P\mathcal{P} of rooted phylogenetic trees can be displayed by a normal network and, further, characterise the minimum number of reticulations needed over all normal networks that display P\mathcal{P}. We then exploit these sequences to show that, for all n3n\ge 3, there exist two rooted binary phylogenetic trees on nn leaves that can be displayed by a tree-child network with a single reticulation, but cannot be displayed by a normal network with less than n2n-2 reticulations.

Keywords

Cite

@article{arxiv.2407.06638,
  title  = {When is a set of phylogenetic trees displayed by a normal network?},
  author = {Magnus Bordewich and Simone Linz and Charles Semple},
  journal= {arXiv preprint arXiv:2407.06638},
  year   = {2024}
}
R2 v1 2026-06-28T17:33:59.673Z