Related papers: On Two Graph-Theoretic Characterizations of Tree C…
There are hierarchical characteristics in the network and how to effectively reveal the hierarchical characteristics in the network is a problem in the research of network structure. If a node is assigned to the community to which it…
The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…
For a simple drawing $D$ of the complete graph $K_n$, two (plane) subdrawings are compatible if their union is plane. Let $\mathcal{T}_D$ be the set of all plane spanning trees on $D$ and $\mathcal{F}(\mathcal{T}_D)$ be the compatibility…
The visual complexity of a graph drawing is defined as the number of geometric objects needed to represent all its edges. In particular, one object may represent multiple edges, e.g., one needs only one line segment to draw two collinear…
The number of spanning trees in a graph $G$ is the total number of distinct spanning subgraphs of $G$ that are trees. In this paper we characterize the unique graph with a prescribed vertex (resp. edge) connectivity, minimum degree and…
We construct a pair of non-isomorphic, bipartite graphs which are not distinguished by counting the number of homomorphisms to any tree. This answers a question motivated by Atserias et al. (LICS 2021). In order to establish the…
Minimum Label Cut (or Hedge Connectivity) problem is defined as follows: given an undirected graph $G=(V, E)$ with $n$ vertices and $m$ edges, in which, each edge is labeled (with one or multiple labels) from a label set $L=\{\ell_1,\ell_2,…
We investigate the parameterized complexity of the recognition problem for the proper $H$-graphs. The $H$-graphs are the intersection graphs of connected subgraphs of a subdivision of a multigraph $H$, and the properness means that the…
Contraction of an edge merges its end points into a new vertex which is adjacent to each neighbor of the end points of the edge. An edge in a $k$-connected graph is {\em contractible} if its contraction does not result in a graph of lower…
Frequent pattern mining is a relevant method to analyse structured data, like sequences, trees or graphs. It consists in identifying characteristic substructures of a dataset. This paper deals with a new type of patterns for tree data:…
Tanglegrams are special graphs that consist of a pair of rooted binary trees with the same number of leaves, and a perfect matching between the two leaf-sets. These objects are of use in phylogenetics and are represented with straightline…
Tree Containment is a fundamental problem in phylogenetics useful for verifying a proposed phylogenetic network, representing the evolutionary history of certain species. Tree Containment asks whether the given phylogenetic tree (for…
Graph matching consists of aligning the vertices of two unlabeled graphs in order to maximize the shared structure across networks; when the graphs are unipartite, this is commonly formulated as minimizing their edge disagreements. In this…
In Chapter 1 we fully characterise pairs of finite graphs which form a gap in the full homomorphism order. This leads to a simple proof of the existence of generalised duality pairs. We also discuss how such results can be carried to…
Structural information of phylogenetic tree topologies plays an important role in phylogenetic inference. However, finding appropriate topological structures for specific phylogenetic inference tasks often requires significant design effort…
The twin-width of a graph measures its distance to co-graphs and generalizes classical width concepts such as tree-width or rank-width. Since its introduction in 2020 (Bonnet et. al. 2020), a mass of new results has appeared relating twin…
In the absence of horizontal gene transfer it is possible to reconstruct the history of gene families from empirically determined orthology relations, which are equivalent to event-labeled gene trees. Knowledge of the event labels…
A graph is circle if its vertices are in correspondence with a family of chords in a circle in such a way that every two distinct vertices are adjacent if and only if the corresponding chords have nonempty intersection. Even though there…
A graph $G$ is called a pairwise compatibility graph (PCG) if there exists an edge weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $l_u$ of $T$ corresponds to a vertex $u \in V$ and there is…
Graph-level representations are crucial tools for characterising structural differences between graphs. However, comparing graphs with different cardinalities, even when sampled from the same underlying distribution, remains challenging.…