Related papers: On Two Graph-Theoretic Characterizations of Tree C…
Quasi-isometry is a measure of how similar two graphs are at `large-scale'. Nguyen, Scott, and Seymour [arXiv:2501.09839] and Hickingbotham [arXiv:2501.10840] independently gave a characterisation of graphs quasi-isometric to graphs of…
We give a short and direct proof of a remarkable identity that arises in the enumeration of labeled trees with respect to their indegree sequence, where all edges are oriented from the vertex with lower label towards the vertex with higher…
The distinguishing number $D(G)$ of a graph $G$ is the least integer $d$ such that $G$ has a vertex labeling with $d$ labels that is preserved only by a trivial automorphism. In this paper we characterize all trees with radius at most three…
We investigate the problem of determining if a given graph corresponds to the dual of a triangulation of a simple polygon. This is a graph recognition problem, where in our particular case we wish to recognize a graph which corresponds to…
Recent investigations in computational biology have focused on a family of 2-colored digraphs, called 2-colored best match graphs, which naturally arise from rooted phylogenetic trees. Actually the defining properties of such graphs are…
Optimal Morse matchings reveal essential structures of cell complexes which lead to powerful tools to study discrete geometrical objects, in particular discrete 3-manifolds. However, such matchings are known to be NP-hard to compute on…
Real-world networks often exhibit strong transitivity with nontrivial local clustering spectra and degree correlations. Such features are not easily modeled in tractable network models, creating an obstacle to the theoretical understanding…
Two genes are xenologs in the sense of Fitch if they are separated by at least one horizontal gene transfer event. Horizonal gene transfer is asymmetric in the sense that the transferred copy is distinguished from the one that remains…
Constructing the maximum spanning tree $T$ of an edge-weighted connected graph $G$ is one of the important research topics in computer science and optimization, and the related research results have played an active role in practical…
For a graph $G$, the tree graph ${\cal T}_{G,t}$ has all tree subgraphs of $G$ with $t$ vertices as vertex set and two tree subgraphs are neighbors if they are edge-disjoint. Also, the $r^{th}$ cut number of $G$ is the minimum number of…
A spanning tree $T$ of a connected graph $G$ is a subgraph of $G$ that is a tree covers all vertices of $G$. The leaf distance of $T$ is defined as the minimum of distances between any two leaves of $T$. A fractional matching of a graph $G$…
We develop a notion of a dual of a graph, generalizing the definition of Goulden and Yong (which only applied to trees), and reproving their main result using our new notion. We in fact give three definitions of the dual: a graph-theoretic…
In general the problem of finding a miminum spanning tree for a weighted directed graph is difficult but solvable. There are a lot of differences between problems for directed and undirected graphs, therefore the algorithms for undirected…
Trigraph list homomorphism problems (also known as list matrix partition problems) have generated recent interest, partly because there are concrete problems that are not known to be polynomial time solvable or NP-complete. Thus while…
A split graph is a graph whose vertex set can be partitioned into a clique and an independent set. A connected graph $G$ is said to be $t$-admissible if admits a spanning tree in which the distance between any two adjacent vertices of $G$…
While the notion of arboricity of a graph is well-known in graph theory, very few results are dedicated to the minimal number of trees covering the edges of a graph, called the tree number of a graph.
A wide variety of problems in computational biology, most notably the assessment of orthology, are solved with the help of reciprocal best matches. Using an evolutionary definition of best matches that captures the intuition behind the…
We provide a finite equational presentation of graphs of treewidth at most three, solving an instanceof an open problem by Courcelle and Engelfriet. We use a syntax generalising series-parallel expressions, denoting graphs with a small…
In this paper, we investigate the computational complexity of subgraph reconfiguration problems in directed graphs. More specifically, we focus on the problem of reconfiguring arborescences in a digraph, where an arborescence is a directed…
Given a connected, undirected graph whose edges are labelled (or coloured), the minimum labelling spanning tree (MLST) problem seeks a spanning tree whose edges have the smallest number of distinct labels (or colours). In recent work, the…