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The aim of this paper is to contribute to the understanding of the pattern formation phenomenon in reaction-diffusion equations coupled with ordinary differential equations. Such systems of equations arise, for example, from modeling of…

Analysis of PDEs · Mathematics 2016-07-15 Anna Marciniak-Czochra , Grzegorz Karch , Kanako Suzuki

When a droplet is brought in contact with an undercooled surface, it wets the substrate and solidifies at the same time. The interplay between the phase transition effects and the contact-line motion, leading to its arrest, remains poorly…

A new detailed mathematical model for dynamics of immune response to hepatitis B is proposed, which takes into account contributions from innate and adaptive immune responses, as well as cytokines. Stability analysis of different steady…

Populations and Evolution · Quantitative Biology 2018-05-16 F. Fatehi Chenar , Y. N. Kyrychko , K. B. Blyuss

The vertebrate adaptive immune system provides a flexible and diverse set of molecules to neutralize pathogens. Yet, viruses such as HIV can cause chronic infections by evolving as quickly as the adaptive immune system, forming an…

Populations and Evolution · Quantitative Biology 2016-06-22 Armita Nourmohammad , Jakub Otwinowski , Joshua B. Plotkin

The structure of sexual contacts, its contacts network and its temporal interactions, play an important role in the spread of sexually transmitted infections. Unfortunately, that kind of data is very hard to obtain. One of the few…

Physics and Society · Physics 2015-06-11 Alexsandro M. Carvalho , Sebastian Goncalves

HIV dynamical models are often based on non-linear systems of ordinary differential equations (ODE), which do not have analytical solution. Introducing random effects in such models leads to very challenging non-linear mixed-effects models.…

Statistics Theory · Mathematics 2010-02-03 D. Commenges , D. Jolly , H. Putter , R. Thiebaut

A delayed model describing the dynamics of HIV (Human Immunodeficiency Virus) with CTL (Cytotoxic T Lymphocytes) immune response is investigated. The model includes four nonlinear differential equations describing the evolution of…

Optimization and Control · Mathematics 2018-06-13 Karam Allali , Sanaa Harroudi , Delfim F. M. Torres

We study a tumor growth model in two space dimensions, where proliferation of the tumor cells leads to expansion of the tumor domain and migration of surrounding normal tissues into the exterior vacuum. The model features two moving…

Analysis of PDEs · Mathematics 2020-02-11 Inwon Kim , Jiajun Tong

Knowledge of the time at which an HIV-infected individual seroconverts, when the immune system starts responding to HIV infection, plays a vital role in the design and implementation of interventions to reduce the impact of the HIV…

Applications · Statistics 2017-06-09 Loumpiana Koulai , Anne Presanis , Gary Murphy , Barbara Suligoi , Daniela De Angelis

A numerical framework for the 'real-time' estimation of the infection risk from airborne diseases (e.g., SARS-CoV-2) in indoor spaces such as hospitals, restaurants, cinemas or teaching rooms is proposed. The developed model is based on the…

Pattern formation often occurs in spatially extended physical, biological and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and…

Pattern Formation and Solitons · Physics 2015-04-14 David Schueler , Sergio Alonso , Alessandro Torcini , Markus Baer

In this article, we propose a network spread model for HIV epidemics, wherein each individual is represented by a node of the transmission network and the edges are the connections between individuals along which the infection may spread.…

Biological Physics · Physics 2007-08-29 Wen-Jie Bai , Tao Zhou , Bing-Hong Wang

During an infection, HIV experiences strong selection by immune system T cells. Recent experimental work has shown that MHC escape mutations form an important pathway for HIV to avoid such selection. In this paper, we study a model of MHC…

Probability · Mathematics 2009-09-02 Sivan Leviyang

The evolutionary dynamics of HIV during the chronic phase of infection is driven by the host immune response and by selective pressures exerted through drug treatment. To understand and model the evolution of HIV quantitatively, the…

Populations and Evolution · Quantitative Biology 2012-08-01 Richard A. Neher , Thomas Leitner

Inevitably, almost all cancer patients develop resistance to targeted therapy. Intratumor heterogeneity (ITH) is a major cause of drug resistance. Mathematical models that explain experiments quantitatively is useful in understanding the…

Soft Condensed Matter · Physics 2021-08-16 Xin Li , D. Thirumalai

AIDS is the pandemic of our era. A disease that scares us not only because it is fatal but also because its insidious time course makes us all potential carriers long before it hands us our heads in a basket. The strange three stage…

Adaptation and Self-Organizing Systems · Physics 2009-10-31 Uri Hershberg , Yoram Louzoun , Henri Atlan , Sorin Solomon

A major contribution to the onset and development of autoimmune disease is known to come from infections. An important practical problem is identifying the precise mechanism by which the breakdown of immune tolerance as a result of immune…

Quantitative Methods · Quantitative Biology 2018-05-21 F. Fatehi Chenar , Y. N. Kyrychko , K. B. Blyuss

Stochastic differential equations characterized by uncertainty are effective in modelling virus dynamics and provide an alternative to traditional deterministic models. Epidemic models are inevitably subjected to the randomness within the…

Dynamical Systems · Mathematics 2024-08-12 Bishal Chhetri , B. V. Ratish Kumar

There has been an increasing recognition of the utility of models of the spatial dynamics of viral spread within tissues. Multicellular models, where cells are represented as discrete regions of space coupled to a virus density surface, are…

Quantitative Methods · Quantitative Biology 2022-08-02 Thomas Williams , James McCaw , James Osborne

The aim of this paper is to find the approximate solution of HIV infection model of CD4+T cells. For this reason, the homotopy analysis transform method (HATM) is applied. The presented method is combination of traditional homotopy analysis…

Other Quantitative Biology · Quantitative Biology 2019-07-18 Samad Noeiaghdam , Emran Khoshrouye Ghiasi