Related papers: On Bijective Variants of the Burrows-Wheeler Trans…
Given a string $T$ on an alphabet of size $\sigma$, we describe a bidirectional Burrows-Wheeler index that takes $O(|T|\log{\sigma})$ bits of space, and that supports the addition \emph{and removal} of one character, on the left or right…
We show how to build several data structures of central importance to string processing, taking as input the Burrows-Wheeler transform (BWT) and using small extra working space. Let $n$ be the text length and $\sigma$ be the alphabet size.…
Compressed suffix arrays (CSAs) index large repetitive collections and are key in many text applications. The r-index and its derivatives combine the run-length Burrows-Wheeler Transform (BWT) with suffix array sampling to achieve space…
Ordering the collection of states of a given automaton starting from an order of the underlying alphabet is a natural move towards a computational treatment of the language accepted by the automaton. Along this path, Wheeler \emph{graphs}…
The Springer numbers are defined in connection with the irreducible root systems of type $B_n$, which also arise as the generalized Euler and class numbers introduced by Shanks. Combinatorial interpretations of the Springer numbers have…
In their paper [1] on Wilf-equivalence for singleton classes, Backelin, Xin, and West introduce a transformation $\phi^*$, defined by an iterative process and operating on (all) full rook placements on Ferrers boards. In [3],…
We present a method, illustrated by several examples, to find explicit counts of permutations containing a given multiset of three letter patterns. The method is recursive, depending on bijections to reduce to the case of a smaller…
A binary word is Sturmian if the occurrences of each letter are balanced, in the sense that in any two factors of the same length, the difference between the number of occurrences of the same letter is at most 1. In digital geometry,…
Letter-to-letter transducers are a standard formalism for modeling reactive systems. Often, two transducers that model similar systems differ locally from one another, by behaving similarly, up to permutations of the input and output…
The FM-index is a well-known compressed full-text index, based on the Burrows-Wheeler transform (BWT). During a pattern search, the BWT sequence is accessed at "random" locations, which is cache-unfriendly. In this paper, we are interested…
In this paper, we define streaming register transducer (SRT), a one-way, letter-to-letter, transductional machine model for transformations of infinite data words whose data domain forms a linear group. Comparing with existing data word…
We consider the problem of determining the maximum number of moves required to sort a permutation of $[n]$ using cut-and-paste operations, in which a segment is cut out and then pasted into the remaining string, possibly reversed. We give…
We show how to merge two run-length compressed Burrows-Wheeler Transforms (RLBWTs) into a run-length compressed extended Burrows-Wheeler Transform (eBWT) in $O (r)$ space and $O ((r + L) \log (m + n))$ time, where $m$ and $n$ are the…
Recently, Holt and McMillan [Bionformatics 2014, ACM-BCB 2014] have proposed a simple and elegant algorithm to merge the Burrows-Wheeler transforms of a family of strings. In this paper we show that the H&M algorithm can be improved so…
In this note we construct a poset map from a Boolean algebra to the Bruhat order which unveils an interesting connection between subword complexes, sorting orders, and certain totally nonnegative spaces. This relationship gives a new proof…
In 1994, Burrows and Wheeler developed a data compression algorithm which performs significantly better than Lempel-Ziv based algorithms. Since then, a lot of work has been done in order to improve their algorithm, which is based on a…
In this paper, we consider the problem of compressing a trie while supporting the powerful \emph{locate} queries: to return the pre-order identifiers of all nodes reached by a path labeled with a given query pattern. Our result builds on…
This paper addresses the problem of checking invariant properties for a large class of symbolic transition systems, defined by a combination of SMT theories and quantifiers. State variables can be functions from an uninterpreted sort…
We give bijective results between several variants of lattice paths of length $2n$ (or $2n-2$) and integer compositions of n, all enumerated by the seemingly innocuous formula $4^{n-1}$. These associations lead us to make new connections…
Bj\"orner and Wachs defined a major index for labeled plane forests and showed that it has the same distribution as the number of inversions. We define and study the distributions of a few other natural statistics on labeled forests.…