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Related papers: Polaron tunneling dynamics in the DNA molecule

200 papers

The two strands of a DNA molecule with a repetitive sequence can pair into many different basepairing patterns. For perfectly periodic sequences, early bulk experiments of Poerschke indicate the existence of a sliding process, permitting…

Biomolecules · Quantitative Biology 2007-05-23 Richard A. Neher , Ulrich Gerland

We investigate the steady-state electronic transport through a suspended dimer molecule coupled to leads. When strongly coupled to a vibrational mode, the electron transport is enhanced at the phonon resonant frequency and higher-order…

Mesoscale and Nanoscale Physics · Physics 2013-02-18 D. H. Santamore , Neill Lambert , Franco Nori

The effect of a solid-vacuum interface on the properties of a strongly coupled electron-phonon system is analyzed using dynamical mean-field theory to solve the Holstein model in a semi-infinite cubic lattice. Polaron formation is found to…

Strongly Correlated Electrons · Physics 2015-05-13 Reza Nourafkan , Massimo Capone , Nasser Nafari

We determine the phase diagram of a polaron model with mixed breathing-mode and Su-Schrieffer-Heeger couplings and show that it has two sharp transitions, in contrast to pure models which exhibit one (for Su-Schrieffer-Heeger coupling) or…

Quantum Gases · Physics 2013-05-31 Felipe Herrera , Kirk W. Madison , Roman V. Krems , Mona Berciu

We apply weak-coupling perturbation theory to the Holstein molecular crystal model in order to compute an electron-phonon correlation function characterizing the shape and size of the polaron lattice distortion in one, two, and three…

Strongly Correlated Electrons · Physics 2009-10-31 Aldo H. Romero , David W. Brown , Katja Lindenberg

The Hamiltonian describing a system of strongly correlated electrons coupled to dispersionless phonons was solved numerically for a ring of 8 atoms using the density matrix renormalization group (DMRG) method. It was found that electron…

Strongly Correlated Electrons · Physics 2007-05-23 Yury Petrov , Takeshi Egami

Motivated by recent experiments on electric transport through single molecules and quantum dots, we investigate a model for transport that allows for significant coupling between the electrons and a boson mode isolated on the molecule or…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Urban Lundin , Ross H. McKenzie

We study the electrical conductance $G$ and the thermopower $S$ of single-molecule junctions, and reveal signatures of different transport mechanisms: off-resonant tunneling, on-resonant coherent (ballistic) motion, and multi-step hopping.…

Mesoscale and Nanoscale Physics · Physics 2017-04-12 Roman Korol , Michael Kilgour , Dvira Segal

By resorting to a model inspired to the standard Davydov and Holstein-Fr\"ohlich models, in the present paper we study the motion of an electron along a chain of heavy particles modelling a sequence of nucleotides proper to a DNA fragment.…

Biological Physics · Physics 2021-08-17 Elham Faraji , Roberto Franzosi , Stefano Mancini , Marco Pettini

The phenomenon of resonant tunneling transport through polar double-barrier heterostructures is systematically investigated using a combined experimental and theoretical approach. On the experimental side, GaN/AlN RTDs are grown by MBE.…

Mesoscale and Nanoscale Physics · Physics 2023-03-16 Jimy Encomendero , Vladimir Protasenko , Berardi Sensale-Rodriguez , Patrick Fay , Farhan Rana , Debdeep Jena , Huili Grace Xing

Here we present theoretical studies of the effect of vibronic coupling on nonlinear transport characteristics (current-voltage and conductance-voltage) in molecular electronic devices. Considered device is composed of molecular quantum dot…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 Kamil Walczak

We investigate the semiclassical mechanism of tunneling process in non-integrable systems. The significant role of complex-phase-space chaos in the description of the tunneling process is elucidated by studying a simple scattering map…

Chaotic Dynamics · Physics 2009-11-10 T. Onishi , A. Shudo , K. S. Ikeda , K. Takahashi

Starting from the $\pi$-electron Pariser-Parr-Pople (PPP) Hamiltonian which includes both strong electron-phonon and electron-electron interactions, we propose some strongly correlated wave functions of increasing quality for the ground…

Condensed Matter · Physics 2009-10-31 S. Pleutin , J-L Fave

The Rice-Sneddon model for BaBiO$_3$ is a nice model Hamiltonian for considering the properties of polarons and bipolarons in a three-dimensional oxide crystal. We use exact diagonalization methods on finite samples to study the stability…

Condensed Matter · Physics 2009-10-28 Vladimir N. Kostur , Philip B. Allen

By a polaronic energy shift, the effective charging energy of molecules can become negative, favoring ground states with even numbers of electrons. Here, we show that charge transport through such molecules near ground-state degeneracies is…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 Jens Koch , M. E. Raikh , Felix von Oppen

We report on electron transport through an artificial molecule formed by two tunnel coupled quantum dots, which are laterally confined in a two-dimensional electron system of an Al$_x$Ga$_{1-x}$As/GaAs heterostructure. Coherent molecular…

Mesoscale and Nanoscale Physics · Physics 2009-10-31 H. Qin , A. W. Holleitner , K. Eberl , R. H. Blick

We investigate the quantum dynamics of two interacting bosonic atoms confined in a one-dimensional anharmonic trap. The tunneling rate, an experimentally measurable parameter of the system, was calculated as a function of the effective…

Atomic Physics · Physics 2017-06-14 I. S. Ishmukhamedov , V. S. Melezhik

We analyze generation of phonons in tunneling structures with two electron states coupled by electron-phonon interaction. The conditions of strong vibration excitations are determined and dependence of non-equilibrium phonon occupation…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 P. I. Arseyev , N. S. Maslova

We study the hopping mechanism of the vibron excitation transport in the simple 1D model of biological macromolecular chains. We supposed that the vibron interaction with thermal oscillations of the macromolecular structural elements will…

Mesoscale and Nanoscale Physics · Physics 2014-12-17 D. Čevizović , Z. Ivic. , S. Galović , A. Chizhov A. , A. Reshetnyak

Bipolaron energies are calculated as a function of wave vector by a variational method of Gurari appropriate for weak or intermediate coupling strengths, for a model with electron-phonon interactions independent of phonon wave vectors and a…

Superconductivity · Physics 2009-11-11 D. M. Eagles , R. M. Quick , B. Schauer