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Related papers: Polaron tunneling dynamics in the DNA molecule

200 papers

We devise a scheme to characterize tunneling of an excess electron shared by a pair of tunnel-coupled dangling bonds on a silicon surface -- effectively a two-level system. Theoretical estimates show that the tunneling should be highly…

Mesoscale and Nanoscale Physics · Physics 2014-02-05 Zahra Shaterzadeh-Yazdi , Lucian Livadaru , Marco Taucer , Josh Mutus , Jason Pitters , Robert A. Wolkow , Barry C. Sanders

The formation of local denaturation zones (bubbles) in double-stranded DNA is an important example for conformational changes of biological macromolecules. We study the dynamics of bubble formation in terms of a Fokker-Planck equation for…

Soft Condensed Matter · Physics 2009-11-10 Andreas Hanke , Ralf Metzler

Statistics of tunneling rates in the presence of chaotic classical dynamics is discussed on a realistic example: a hydrogen atom placed in parallel uniform static electric and magnetic fields, where tunneling is followed by ionization along…

Chaotic Dynamics · Physics 2009-11-10 Dominique Delande , Jakub Zakrzewski

We investigate polaron formation in a many-electron system in the presence of a local repulsion sufficiently strong to prevent local-bipolaron formation. Specifically, we consider a Hubbard-Holstein model of interacting electrons coupled to…

Strongly Correlated Electrons · Physics 2007-08-07 Massimo Capone , Marco Grilli , Walter Stephan

We present a very simple model for the study of charge transport in a molecule patterned on B-DNA. In this model we use a discrete non-linear Schr\"{o}dinger equation to describe electrons propagating along the sugar-phosphate backbone of…

Soft Condensed Matter · Physics 2009-11-10 Niels R. Walet , Wojtek J. Zakrzewski

Using a three-dimensional quasiclassical technique we explore molecular double ionization by a linearly polarized, infrared (800~nm) 27~fs laser pulse. For intensities ranging from the tunneling to the over-the-barrier regime, we identify…

Atomic Physics · Physics 2011-01-27 A. Emmanouilidou , D. S. Tchitchekova

We consider tunneling transitions between states separated by an energy barrier in a simple field theoretical model. We analyse the case of soliton creation induced by collisions of a few highly energetic particles. We present…

High Energy Physics - Theory · Physics 2009-11-10 D. G. Levkov , S. M. Sibiryakov

Electron-positron pair creation due to combined nuclear Coulomb and strong laser fields is investigated for the tunneling regime. The energy spectra and angular distributions of the pair are found analytically for the first time. The energy…

Atomic Physics · Physics 2009-11-13 M. Yu. Kuchiev , D. J. Robinson

The formation of a finite density multipolaronic state is analyzed in the context of the Holstein model using the Dynamical Mean-Field Theory. The spinless and spinful fermion cases are compared to disentangle the polaron crossover from the…

Strongly Correlated Electrons · Physics 2007-08-07 M. Capone , S. Ciuchi

By considering a metal/polymer/metal structure within a tight-binding one-dimensional model, we have investigated the polaron formation in the presence of an electric field. When a sufficient voltage bias is applied to one of the metal…

Strongly Correlated Electrons · Physics 2009-11-10 C. Q. Wu , Y. Qiu , K. Nasu

Al-$\delta$-GaAs structures are studied where tunneling to one or more subbands of the 2D electron system of a near-surface delta-doped layer is observed. Reflection of electrons at the threshold of the emission of LO-phonon is observed.…

Mesoscale and Nanoscale Physics · Physics 2020-08-28 S. E. Dizhur , I. N. Kotel'nikov , E. M. Dizhur

The phase diagram of a water solution of DNA and oppositely charged spherical macroions is studied. DNA winds around spheres to form beads-on-a-string complexes resembling the chromatin 10 nm fiber. At small enough concentration of spheres…

Soft Condensed Matter · Physics 2009-11-07 Toan T. Nguyen , Boris I. Shklovskii

We present numerical exact results for the polaronic band structure of the Holstein molecular crystal model in one and two dimensions. The use of direct Lanczos diagonalization technique, preserving the full dynamics and quantum nature of…

Condensed Matter · Physics 2009-10-30 G. Wellein , H. Fehske

Using long C_{N}H_{2} conjugated carbon chains with the polyynic structure as prototypical examples of one-dimensional (1D) semiconductors, we discuss self-localization of excess charge carriers into 1D large polarons in the presence of the…

Materials Science · Physics 2009-11-13 M. L. Mayo , Yu. N. Gartstein

The binding of a system of $N$ polarons subject to a constant magnetic field of strength $B$ is investigated within the Pekar-Tomasevich approximation. In this approximation the energy of $N$ polarons is described in terms of a…

Mathematical Physics · Physics 2013-01-28 Ioannis Anapolitanos , Marcel Griesemer

We study the fluctuational dynamics of a tagged base-pair in double stranded DNA. We calculate the drift force which acts on the tagged base-pair using a potential model that describes interactions at base pairs level and use it to…

Soft Condensed Matter · Physics 2011-06-28 Shikha Srivastava , Yashwant Singh

We study the tautomeric transitions in base pairs of DNA considering elastic properties of DNA as classical and tunneling of protons as quantum, and show that the dynamics of the transitions admits of soliton like solutions whose shape and…

Soft Condensed Matter · Physics 2007-05-23 V. L. Golo , Yu. S. Volkov

The vibronic mixing by an odd-parity vibrational mode of two opposite-parity nearly-degenerate electronic states at a molecular site may drive the small polaron off-center. An associated electric dipole may occur due to broken inversion…

Superconductivity · Physics 2007-05-23 M. Georgiev , M. Borissov

We describe the formation and properties of Holstein polarons in the entire parameter regime. Our presentation focuses on the polaron mass and radius, which we obtain with an improved numerical technique. It is based on the combination of…

Strongly Correlated Electrons · Physics 2010-04-27 Andreas Alvermann , Holger Fehske , Stuart A. Trugman

Using the momentum average approximation we study the importance of adding higher-than-linear terms in the electron-phonon coupling on the properties of single polarons described by a generalized Holstein model. For medium and strong linear…

Strongly Correlated Electrons · Physics 2013-06-13 C. P. J. Adolphs , M. Berciu