Polymer translocation through nanopore assisted by an environment of active rods
Soft Condensed Matter
2021-02-03 v1
Abstract
We use a combination of computer simulations and iso-flux tension propagation (IFTP) theory to investigate translocation dynamics of a flexible linear polymer through a nanopore into an environment composed of repulsive active rods in 2D. We demonstrate that the rod activity induces a crowding effect on the polymer, leading to a time-dependent net force that facilitates translocation into the active environment. Incorporating this force into the IFTP theory for pore-driven translocation allows us to characterise translocation dynamics in detail and derive a scaling form for the average translocation time as , where and are the rod length and self-propelling force acting on the rods, respectively, and is the Flory exponent.
Cite
@article{arxiv.2011.04621,
title = {Polymer translocation through nanopore assisted by an environment of active rods},
author = {Hamidreza Khalilian and Jalal Sarabadani and Tapio Ala-Nissila},
journal= {arXiv preprint arXiv:2011.04621},
year = {2021}
}