English

Polymer translocation into a fluidic channel through a nanopore

Soft Condensed Matter 2010-08-30 v1

Abstract

Using two dimensional Langevin dynamics simulations, we investigate the dynamics of polymer translocation into a fluidic channel with diameter RR through a nanopore under a driving force FF. Due to the crowding effect induced by the partially translocated monomers, the translocation dynamics is significantly altered in comparison to an unconfined environment, namely, we observe a nonuniversal dependence of the translocation time τ\tau on the chain length NN. τ\tau initially decreases rapidly and then saturates with increasing RR, and a dependence of the scaling exponent α\alpha of τ\tau with NN on the channel width RR is observed. The otherwise inverse linear scaling of τ\tau with FF breaks down and we observe a minimum of α\alpha as a function of FF. These behaviors are interpreted in terms of the waiting time of an individual segment passing through the pore during translocation.

Keywords

Cite

@article{arxiv.1008.2272,
  title  = {Polymer translocation into a fluidic channel through a nanopore},
  author = {Kaifu Luo and Ralf Metzler},
  journal= {arXiv preprint arXiv:1008.2272},
  year   = {2010}
}

Comments

8 pages, 12 figures. To appear in Phys. Rev. E

R2 v1 2026-06-21T16:00:22.259Z