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相关论文: Simulation in Biology

200 篇论文

Simulation is a useful tool in situations where training data for machine learning models is costly to annotate or even hard to acquire. In this work, we propose a reinforcement learning-based method for automatically adjusting the…

机器学习 · 计算机科学 2019-05-15 Nataniel Ruiz , Samuel Schulter , Manmohan Chandraker

Declarative modeling uses symbolic expressions to represent models. With such expressions one can formalize high-level mathematical computations on models that would be difficult or impossible to perform directly on a lower-level simulation…

定量方法 · 定量生物学 2019-07-02 Eric Mjolsness

Computer-based modelling and simulation have become useful tools to facilitate humans to understand systems in different domains, such as physics, astrophysics, chemistry, biology, economics, engineering and social science. A complex system…

人工智能 · 计算机科学 2021-02-03 Xing Su , Yan Kong , Weihua Li

R is a language and environment for statistical computing and graphics, which provides a wide variety of statistical tools (modeling, statistical testing, time series analysis, classification problems, machine learning, ...), together with…

其他统计学 · 统计学 2023-06-22 M. Isabel Parra , Eva L. Sanjuán , M. Carmen Robustillo , Mario M. Pizarro

Computer simulations that demonstrate the valueof novel approaches are crucial to developing more flexibleand robust power systems operations with high penetrations ofrenewable energy at multiple geographic and temporal scales.However,…

系统与控制 · 电气工程与系统科学 2020-09-01 Jose Daniel Lara , Jonathan T. Lee , Duncan Callaway , Bri-Mathias Hodge

Generative models trained on internet data have revolutionized how text, image, and video content can be created. Perhaps the next milestone for generative models is to simulate realistic experience in response to actions taken by humans,…

Replica Exchange (RE) simulations have emerged as an important algorithmic tool for the molecular sciences. RE simulations involve the concurrent execution of independent simulations which infrequently interact and exchange information. The…

分布式、并行与集群计算 · 计算机科学 2016-01-22 Antons Treikalis , Andre Merzky , Haoyuan Chen , Tai-Sung Lee , Darrin M. York , Shantenu Jha

Language sciences rely less and less on formal syntax as their base. The reason is probably its lack of psychological reality, knowingly avoided. Philosophers of science call for a paradigm shift in which explanations are by mechanisms, as…

计算与语言 · 计算机科学 2022-05-26 Anat Ninio

The evolution of complexity has been a central theme for Biology [2] and Artificial Life research [1]. It is generally agreed that complexity has increased in our universe, giving way to life, multi-cellularity, societies, and systems of…

种群与进化 · 定量生物学 2011-09-06 Carlos Gershenson , Tom Lenaerts

Epistemology is the branch of philosophy that deals with gaining knowledge. It is closely related to ontology. The branch that deals with questions like "What is real?" and "What do we know?" as it provides these components. When using…

综合文献 · 计算机科学 2013-06-24 Andreas Tolk , Saikou Y. Diallo , Jose J. Padilla , Ross Gore

Biological, linguistic, sociological and economical applications of statistical physics are reviewed here. They have been made on a variety of computers over a dozen years, not only at the NIC computers. A longer description can be found in…

科普物理 · 物理学 2007-05-23 D. Stauffer

What does it mean to claim that a physical or natural system computes? One answer, endorsed here, is that computing is about programming a system to behave in different ways. This paper offers an account of what it means for a physical…

信息论 · 计算机科学 2013-06-18 Hector Zenil

Natural language provides a widely accessible and expressive interface for robotic agents. To understand language in complex environments, agents must reason about the full range of language inputs and their correspondence to the world.…

计算与语言 · 计算机科学 2017-10-03 Stephanie Zhou , Alane Suhr , Yoav Artzi

This paper presents a probabilistic extension of the well-known cellular automaton, Game of Life. In Game of Life, cells are placed in a grid and then watched as they evolve throughout subsequent generations, as dictated by the rules of the…

人工智能 · 计算机科学 2022-01-25 Simon Vandevelde , Joost Vennekens

Despite widespread interests in reinforcement-learning for task-oriented dialogue systems, several obstacles can frustrate research and development progress. First, reinforcement learners typically require interaction with the environment,…

机器学习 · 计算机科学 2017-11-15 Xiujun Li , Zachary C. Lipton , Bhuwan Dhingra , Lihong Li , Jianfeng Gao , Yun-Nung Chen

Molecular simulations and biophysical experiments can be used to provide independent and complementary insights into the molecular origin of biological processes. A particularly useful strategy is to use molecular simulations as a modelling…

化学物理 · 物理学 2019-12-10 Simone Orioli , Andreas Haahr Larsen , Sandro Bottaro , Kresten Lindorff-Larsen

The ability to combine linguistic guidance from others with direct experience is central to human development, enabling safe and rapid learning in new environments. How do people integrate these two sources of knowledge, and how might AI…

Computational models pervade all branches of the exact sciences and have in recent times also started to prove to be of immense utility in some of the traditionally 'soft' sciences like ecology, sociology and politics. This volume is a…

We give an overview of our philosophy of pictures in mathematics. We emphasize a bi-directional process between picture language and mathematical concepts: abstraction and simulation. This motivates a program to understand different…

历史与综述 · 数学 2018-03-13 Arthur Jaffe , Zhengwei Liu

With the advent of large language models (LLMs), there is a growing interest in applying LLMs to scientific tasks. In this work, we conduct an experimental study to explore applicability of LLMs for configuring, annotating, translating,…

人机交互 · 计算机科学 2025-10-13 Orcun Yildiz , Tom Peterka