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Sacrificial bonds and hidden length in structural molecules account for the greatly increased fracture toughness of biological materials compared to synthetic materials without such structural features, by providing a molecular-scale…

软凝聚态物质 · 物理学 2014-05-07 Charles K. C. Lieou , Ahmed E. Elbanna , Jean M. Carlson

Membrane shape fluctuations induce attractive interactions between rigid inclusions. Previous analytical studies showed that the fluctuation-induced pair interactions are rather small compared to thermal energies, but also that multi-body…

软凝聚态物质 · 物理学 2009-11-07 Thomas R Weikl

Using dissipative particle dynamics (DPD) simulation method, we study the phase separation dynamics in block copolymer (BCP) melt in $d=3$, subjected to external stimuli such as light. An initial homogeneous BCP melt is rapidly quenched to…

软凝聚态物质 · 物理学 2020-11-17 Ashish Kumar Singh , Avinash Chauhan , Sanjay Puri , Awaneesh Singh

A constitutive model based on the combination of damage mechanics and plasticity is developed to analyse concrete structures subjected to dynamic loading. The aim is to obtain a model, which requires input parameters with clear physical…

材料科学 · 物理学 2011-03-09 Peter Grassl , Ulrika Nystrom , Rasmus Rempling , Kent Gylltoft

A combination of reaction-diffusion models with moving-boundary problems yields a system in which the diffusion (spreading and penetration) and reaction (transformation) evolve the system's state and geometry over time. These systems can be…

计算工程、金融与科学 · 计算机科学 2020-08-26 Mojtaba Barzegari , Liesbet Geris

Using Brownian dynamics, we simulate the fracture of polymer interfaces reinforced by diblock connector chains. We find that for short chains the interface fracture toughness depends linearly on the degree of polymerization $N$ of the…

材料科学 · 物理学 2009-10-31 Mohsen Sabouri-Ghomi , Slava Ispolatov , Martin Grant

Recently experiments showed that some adhesive receptor-ligand complexes increase their lifetimes when they are stretched by mechanical force, while the force increase beyond some thresholds their lifetimes decrease. Several specific…

细胞行为 · 定量生物学 2009-11-13 Fei Liu , Zhong-can Ou-Yang

We consider the lateral diffusion of a protein interacting with the curvature of the membrane. The interaction energy is minimized if the particle is at a membrane position with a certain curvature that agrees with the spontaneous curvature…

软凝聚态物质 · 物理学 2008-12-10 Stefan M. Leitenberger , Ellen Reister-Gottfried , Udo Seifert

In the present work we theoretically study the length dependence of thermopower of a single-molecule junction with a chain-like molecular bridge of an arbitrary length using a tight-binding model. We analyze conditions bringing a nonlinear…

介观与纳米尺度物理 · 物理学 2017-03-20 Natalya A. Zimbovskaya

Molecular dynamics studies of Go models of proteins with the 10-12 contact potential and the bond and dihedral angle terms indicate statistical similarities to other Go models, e.g. with the Lennard-Jones contact potentials. The folding…

统计力学 · 物理学 2015-06-24 Marek Cieplak , Trinh Xuan Hoang

We consider the thermally activated fragmentation of a homopolymer chain. In our simple model the dynamics of the intact chain is a Rouse one until a bond breaks and bond breakdown is considered as a first passage problem over a barrier to…

软凝聚态物质 · 物理学 2015-05-14 S. Fugmann , I. M. Sokolov

The question of decoupling and freeze-out is reinvestigated and analysed in terms of transparent semi-classical decoupling formulae, which provide a smooth decoupling in time both, for single and two particle inclusive spectra. They…

核理论 · 物理学 2014-11-18 J. Knoll

Different types of ligands compete in binding to polymers with different consequences for the physical and chemical properties of the resulting complex. Here, we derive a general kinetic model for the competitive binding kinetics of…

软凝聚态物质 · 物理学 2024-05-21 Juan P. G. Villaluenga , David Brunete , Francisco Javier Cao-Garcia

We compare the spatial correlations of bond-breaking events and bond-orientational relaxation in a model two-dimensional liquid undergoing Newtonian dynamics. We find that the relaxation time of the bond-breaking correlation function is…

统计力学 · 物理学 2016-08-03 Elijah Flenner , Grzegorz Szamel

Recently experiments showed that some biological noncovalent bonds increase their lifetimes when they are stretched by an external force, and their lifetimes will decrease when the force increases further. Several specific quantitative…

统计力学 · 物理学 2009-11-11 Fei Liu , Zhong-can Ou-Yang , Mitsumasa Iwamoto

Based on the trajectories of the separation between water molecule pairs from MD simulations, we investigate the bond breakage dynamics in bulk water. From the spectrum of mean first-passage times, the Fokker-Planck equation allows us to…

软凝聚态物质 · 物理学 2011-11-08 Yann von Hansen , Felix Sedlmeier , Michael Hinczewski , Roland R. Netz

Nanoparticles with multiple ligands have been proposed for use in nanomedicine. The multiple targeting ligands on each nanoparticle can bind to several locations on a cell surface facilitating both drug targeting and uptake. Experiments…

介观与纳米尺度物理 · 物理学 2015-05-18 Jack N. Waddell , Douglas G. Mullen , Bradford G. Orr , Mark M. Banaszak Holl , Leonard M. Sander

Fragility index and cooperativity length characterizing the molecular mobility in the amorphous phase are for the first time calculated in drawn polylactide (PLA). The microstructure of the samples is investigated from wide-angle X-ray…

软凝聚态物质 · 物理学 2015-09-18 Nicolas Delpouve , Laurent Delbreilh , Grégory Stoclet , Allisson Saiter , Eric Dargent

We examined theory for force-induced unbinding on a two-dimensional free energy surface where the internal dynamics of biomolecules is coupled with the rupture process under constant tension f. We show that only if the transition state…

软凝聚态物质 · 物理学 2017-01-24 Changbong Hyeon

A theory is presented for the membrane junction separation induced by the adhesion between two biomimetic membranes that contain two different types of anchored junctions (receptor/ligand complexes). The analysis shows that several…

软凝聚态物质 · 物理学 2009-11-07 Hsuan-Yi Chen