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Efficient execution of parameter sensitivity analysis (SA) is critical to allow for its routinely use. The pathology image processing application investigated in this work processes high-resolution whole-slide cancer tissue images from…

分布式、并行与集群计算 · 计算机科学 2019-11-01 Eduardo Scartezini , Willian Barreiros , Tahsin Kurc , Jun Kong , Alba C. M. A. Melo , Joel Saltz , George Teodoro

We present a novel multiscale simulation approach for modeling stochasticity in chemical reaction networks. The approach seamlessly integrates exact-stochastic and "leaping" methodologies into a single "partitioned leaping" algorithmic…

化学物理 · 物理学 2009-11-11 Leonard A. Harris , Paulette Clancy

We apply the conformational space annealing (CSA) method to the Lennard-Jones clusters and find all known lowest energy configurations up to 201 atoms, without using extra information of the problem such as the structures of the known…

统计力学 · 物理学 2009-11-10 Julian Lee , In-Ho Lee , Jooyoung Lee

Finding the ground state of Ising spin glasses is notoriously difficult due to disorder and frustration. Often, this challenge is framed as a combinatorial optimization problem, for which a common strategy employs simulated annealing, a…

We introduce Simulated Bifurcation Quantum Annealing (SBQA), a quantum-inspired optimization algorithm that extends simulated bifurcation by incorporating inter-replica interactions to mimic quantum tunneling. SBQA retains the efficiency…

量子物理 · 物理学 2026-04-08 Jakub Pawłowski , Paweł Tarasiuk , Jan Tuziemski , Łukasz Pawela , Bartłomiej Gardas

We describe an adaptation of the simulated annealing algorithm to nonparametric clustering and related probabilistic models. This new algorithm learns nonparametric latent structure over a growing and constantly churning subsample of…

机器学习 · 统计学 2019-10-25 Fritz Obermeyer , Jonathan Glidden , Eric Jonas

Clustering is a powerful machine learning technique that groups "similar" data points based on their characteristics. Many clustering algorithms work by approximating the minimization of an objective function, namely the sum of…

量子物理 · 物理学 2018-01-29 Vaibhaw Kumar , Gideon Bass , Casey Tomlin , Joseph Dulny

In this work we propose a highly optimized version of a simulated annealing (SA) algorithm adapted to the more recently developed Graphic Processor Units (GPUs). The programming has been carried out with CUDA toolkit, specially designed for…

分布式、并行与集群计算 · 计算机科学 2024-08-02 A. M. Ferreiro , J. A. García , J. G. López-Salas , C. Vázquez

This paper develops a new global optimisation method that applies to a family of criteria that are not entirely known. This family includes the criteria obtained from the class of posteriors that have nor-malising constants that are…

统计理论 · 数学 2019-07-16 R. Stoica , Madalina Deaconu , Anne Philippe , Lluis Hurtado

A generic algorithm for the extraction of probabilistic (Bayesian) information about model parameters from data is presented. The algorithm propagates an ensemble of particles in the product space of model parameters and outputs. Each…

统计计算 · 统计学 2015-09-18 Carlo Albert

We propose a variant of the Simulated Annealing method for optimization in the multivariate analysis of differentiable functions. The method uses global actualizations via the Hybrid Monte Carlo algorithm in their generalized version for…

统计力学 · 物理学 2009-10-30 R. Salazar , R. Toral

The random-phase approximation with second-order screened exchange (RPA+SOSEX) is a model of electron correlation energy with two caveats: its accuracy depends on an arbitrary choice of mean field, and it scales as $\mathcal{O}(n^5)$…

材料科学 · 物理学 2014-01-16 Jonathan E. Moussa

Cluster analysis which focuses on the grouping and categorization of similar elements is widely used in various fields of research. Inspired by the phenomenon of atomic fission, a novel density-based clustering algorithm is proposed in this…

机器学习 · 计算机科学 2020-04-28 Shizhan Lu

Stochastic approximation (SA) is a powerful class of iterative algorithms for nonlinear root-finding that can be used for minimizing a loss function, $L(\boldsymbol{\theta})$, with respect to a parameter vector $\boldsymbol{\theta}$, when…

最优化与控制 · 数学 2017-07-24 Karla Hernández Cuevas

Spectral clustering approaches have led to well-accepted algorithms for finding accurate clusters in a given dataset. However, their application to large-scale datasets has been hindered by computational complexity of eigenvalue…

机器学习 · 计算机科学 2016-03-17 Shahzad Bhatti , Carolyn Beck , Angelia Nedic

Recently popularized randomized methods for principal component analysis (PCA) efficiently and reliably produce nearly optimal accuracy --- even on parallel processors --- unlike the classical (deterministic) alternatives. We adapt one of…

统计计算 · 统计学 2011-12-23 Nathan Halko , Per-Gunnar Martinsson , Yoel Shkolnisky , Mark Tygert

In this paper, we introduce stochastic simulated quantum annealing (SSQA) for large-scale combinatorial optimization problems. SSQA is designed based on stochastic computing and quantum Monte Carlo, which can simulate quantum annealing (QA)…

量子物理 · 物理学 2024-07-25 Naoya Onizawa , Ryoma Sasaki , Duckgyu Shin , Warren J. Gross , Takahiro Hanyu

Theory of simulated annealing (SA), a method for equilibrium and stability analyses for Hamiltonian systems, is reviewed. The SA explained in this review is based on a double bracket formulation that derives from Hamiltonian structure. In…

等离子体物理 · 物理学 2024-09-27 M. Furukawa , P. J. Morrison

Soft-constraint affinity propagation (SCAP) is a new statistical-physics based clustering technique. First we give the derivation of a simplified version of the algorithm and discuss possibilities of time- and memory-efficient…

数据分析、统计与概率 · 物理学 2008-10-20 Michele Leone , Sumedha , Martin Weigt

Improved constraints on current model parameters in a heavy-ion collision model are established using the latest measurements from three distinct collision systems. Various observables are utilized from Au--Au collisions at…

高能物理 - 唯象学 · 物理学 2024-11-05 Maxim Virta , Jasper Parkkila , Dong Jo Kim