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Chemotaxis, i.e. motion generated by chemical gradients, is a motility mode shared by many living species that has been developed by evolution to optimize certain biological processes such as foraging or immune response. In particular,…

软凝聚态物质 · 物理学 2023-05-24 Hugues Meyer , Heiko Rieger

Classic experiments on the distribution of ducks around separated food sources found consistency with the `ideal free' distribution in which the local population is proportional to the local supply rate. Motivated by this experiment and…

生物物理 · 物理学 2015-08-19 Francois J. Peaudecerf , Raymond E. Goldstein

Bacterial colonies are a well-known example of living active matter, exhibiting collective behaviors such as nematic alignment and collective motion that play an important role in the spread of microbial infections. While the underlying…

In growing active matter systems, a large collection of engineered or living autonomous units metabolize free energy and create order at different length scales as they proliferate and migrate collectively. One such example is bacterial…

软凝聚态物质 · 物理学 2021-06-15 Japinder Nijjer , Changhao Li , Qiuting Zhang , Haoran Lu , Sulin Zhang , Jing Yan

In many adult tissues, stem cells and differentiated cells are not homogeneously distributed : stem cells are arranged in periodic "niches", and differentiated cells are constantly produced and migrate out of these niches. In this article,…

生物物理 · 物理学 2016-03-23 Edouard Hannezo , Alice Coucke , Jean-François Joanny

We study single cell E.coli chemotaxis in a spatio-temporally varying attractant environment. Modeling the attractant concentration in the form of a traveling sine wave, we measure in our simulations, the chemotactic drift velocity of the…

细胞行为 · 定量生物学 2025-06-06 Shobhan Dev Mandal , Sakuntala Chatterjee

Turing instabilities for a two species reaction-diffusion systems is studied under anisotropic diffusion. More specifically, the diffusion constants which characterize the ability of the species to relocate in space are direction sensitive.…

In this article we highlight chemotaxis (cellular movement) as a rich source of potential engineering applications and computational models, highlighting current research and possible future work. We first give a brief description of the…

细胞行为 · 定量生物学 2007-05-23 Martyn Amos , David A. Hodgson , Alan Gibbons

The fracture mechanics was widely employed to explain the crack propagation in the deposition produced by drying colloidal suspension. However, more complex than conventional fracture, those cracks periodically distribute and make up a…

软凝聚态物质 · 物理学 2014-02-14 Jun Ma , Guangyin Jing

The emergence of large scale structures in biological systems, and in particular the formation of lines of hierarchy, is observed in many scales, from collections of cells to groups of insects to herds of animals. Motivated by phenomena in…

适应与自组织系统 · 物理学 2023-07-12 James Greene , Eitan Tadmor , Ming Zhong

Rotating clusters or vortices are formations of agents that rotate around a common center. These patterns may be found in very different contexts: from swirling fish to surveillance drones. Here, we propose a minimal model for…

适应与自组织系统 · 物理学 2023-05-16 Julia Cantisán , Jesús M. Seoane , Miguel A. F. Sanjuán

Actin networks in certain single-celled organisms exhibit a complex pattern-forming dynamics that starts with the appearance of static spots of actin on the cell cortex. Spots soon become mobile, executing persistent random walks, and…

亚细胞过程 · 定量生物学 2013-05-29 Stephen Whitelam , Till Bretschneider , Nigel J. Burroughs

Turing instability in activator-inhibitor systems provides a paradigm of nonequilibrium pattern formation; it has been extensively investigated for biological and chemical processes. Turing pattern formation should furthermore be possible…

适应与自组织系统 · 物理学 2010-05-13 Hiroya Nakao , Alexander S. Mikhailov

Flocks of birds and schools of fish are familiar examples of spatial patterns formed by living organisms. In contrast to the patterns on the skins of, say, zebra and giraffe, the patterns of our interest are {\it transient} although…

种群与进化 · 定量生物学 2007-05-23 Debashish Chowdhury , Katsuhiro Nishinari , Andreas Schadschneider

A discrete chemotactic predator-prey model is proposed in which the prey secrets a diffusing chemical which is sensed by the predator and vice versa. Two dynamical states corresponding to catching and escaping are identified and it is shown…

种群与进化 · 定量生物学 2015-05-20 Ankush Sengupta , Tobias Kruppa , Hartmut Löwen

Patterns are quotidian in nature. Distinct multiscale patterns are generally a consequence of nonequilibrium dynamical processes associated with mechanical or hydrodynamic instabilities. In this thesis, I report experimental investigations…

软凝聚态物质 · 物理学 2019-05-30 Xiaolei Ma

Bacterial chemotaxis is one of the most extensively studied adaptive responses in cells. Many bacteria are able to bias their apparently random motion to produce a drift in the direction of the increasing chemoattractant concentration. It…

软凝聚态物质 · 物理学 2018-02-07 E. V. Pankratova , A. I. Kalyakulina , M. I. Krivonosov , S. Denisov , K. M. Taute , V. Yu. Zaburdaev

This research found that when an acidic solution with a low surface tension spread on the surface of a glycerol solution mixed with milk, a star shaped pattern was spontaneously formed on the surface in the horizontal plane during the…

软凝聚态物质 · 物理学 2021-02-03 Michiko Shimokawa , Hiroyuki Kitahata , Hidetsugu Sakaguchi

Growing tissue and bacterial colonies are active matter systems where cell divisions and cellular motion generate active stress. Although they operate in the non-equilibrium regime, these biological systems can form large-scale ordered…

生物物理 · 物理学 2019-05-28 Yusuf Ilker Yaman , Esin Demir , Roman Vetter , Askin Kocabas

Active fluids made of powered suspended particles have unique abilities to self-generate flow and density structures. How such dynamics can be triggered and leveraged by external cues is a key question of both biological and applied…

软凝聚态物质 · 物理学 2025-07-21 Malo Marmol , Cécile Cottin-Bizonne , Andrejs Cebers , Damien Faivre , Christophe Ybert