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Background: Computational analysis of next-generation sequencing data is outpaced by data generation in many cases. In one such case, paired-end reads can be produced from the Illumina sequencing method faster than they can be overlapped by…

基因组学 · 定量生物学 2013-04-18 Russell J. Dickson , Gregory B. Gloor

In this paper, we provide a deterministic polynomial time algorithm that determines satisfiability of 3-SAT. The complexity analysis for the algorithm takes into account no efficiency and yet provides a low enough bound, that efficient…

数据结构与算法 · 计算机科学 2020-07-02 Ortho Flint , Asanka Wickramasinghe , Jason Brasse , Christopher Fowler

The question of whether the complexity class P is equal to the complexity class NP has been a seemingly intractable problem for over 4 decades. It has been clear that if an algorithm existed that would solve the problems in the NP class in…

计算复杂性 · 计算机科学 2015-06-04 Jason W. Steinmetz

The problem 2-quantum-satisfiability (2-QSAT) is the generalisation of the 2-CNF-SAT problem to quantum bits, and is equivalent to determining whether or not a spin-1/2 Hamiltonian with two-body terms is frustration-free. Similarly to the…

量子物理 · 物理学 2014-07-02 Niel de Beaudrap

This work introduces StageSAT, a new approach to solving floating-point satisfiability that bridges SMT solving with numerical optimization. StageSAT reframes a floating-point formula as a series of optimization problems in three stages of…

编程语言 · 计算机科学 2026-01-09 Yuanzhuo Zhang , Zhoulai Fu , Binoy Ravindran

A new quantum algorithm is proposed to solve Satisfiability(SAT) problems by taking advantage of non-unitary transformation in ground state quantum computer. The energy gap scale of the ground state quantum computer is analyzed for 3-bit…

量子物理 · 物理学 2015-06-26 Wenjin Mao

PolySAT is a word-level decision procedure supporting bit-precise SMT reasoning over polynomial arithmetic with large bit-vector operations. The PolySAT calculus extends conflict-driven clause learning modulo theories with two key…

计算机科学中的逻辑 · 计算机科学 2024-06-10 Jakob Rath , Clemens Eisenhofer , Daniela Kaufmann , Nikolaj Bjørner , Laura Kovács

A recent paper by Jordan et al. introduced Decoded Quantum Interferometry (DQI), a novel quantum algorithm that uses the quantum Fourier transform to reduce linear optimization problems -- max-XORSAT and max-LINSAT -- to decoding problems.…

量子物理 · 物理学 2026-03-11 Daniel Cohen Hillel

Optimization problems such as the NP-complete 3-SAT provide an important benchmark for the difficult task of finding ground-states in strongly correlated many-body systems with rugged energy landscapes. The study of random 3-SAT problems as…

统计力学 · 物理学 2026-05-21 J. Schwardt , J. C. Budich

High-dimensional numerical optimization presents a persistent challenge in computational science. This paper introduces Quasi-Adaptive Search with Asymptotic Reinitialization (QUASAR), an evolutionary algorithm to accelerate convergence in…

最优化与控制 · 数学 2026-02-03 Julian G. Soltes

We present a quantum adiabatic algorithm for a set of quantum 2-satisfiability (Q2SAT) problem, which is a generalization of 2-satisfiability (2SAT) problem. For a Q2SAT problem, we construct the Hamiltonian which is similar to that of a…

量子物理 · 物理学 2021-02-08 Yanglin Hu , Zhelun Zhang , Biao Wu

Boolean satisfiability [1] (k-SAT) is one of the most studied optimization problems, as an efficient (that is, polynomial-time) solution to k-SAT (for $k\geq 3$) implies efficient solutions to a large number of hard optimization problems…

计算复杂性 · 计算机科学 2012-08-03 Maria Ercsey-Ravasz , Zoltan Toroczkai

Satisfiability problem (SAT) is a cornerstone of computational complexity with broad industrial applications, and it remains challenging to optimize modern SAT solvers in real-world settings due to their intricate architectures. While…

人工智能 · 计算机科学 2025-07-31 Yiwen Sun , Furong Ye , Zhihan Chen , Ke Wei , Shaowei Cai

The search of hardware-compatible strategies for solving NP-hard combinatorial optimization problems (COPs) is an important challenge of today s computing research because of their wide range of applications in real world optimization…

Here we study the NP-complete $K$-SAT problem. Although the worst-case complexity of NP-complete problems is conjectured to be exponential, there exist parametrized random ensembles of problems where solutions can typically be found in…

无序系统与神经网络 · 物理学 2019-07-11 Hendrik Schawe , Roman Bleim , Alexander K. Hartmann

With the slowdown of improvement in conventional von Neumann systems, increasing attention is paid to novel paradigms such as Ising machines. They have very different approach to NP-complete optimization problems. Ising machines have shown…

人工智能 · 计算机科学 2023-05-03 Anshujit Sharma , Matthew Burns , Andrew Hahn , Michael Huang

Boolean satisfiability (SAT) is a propositional logic problem of determining whether an assignment of variables satisfies a Boolean formula. Many combinatorial optimization problems can be formulated in Boolean SAT logic -- either as k-SAT…

最优化与控制 · 数学 2026-03-12 Robert Simon Fong , Yanming Song , Alexander Yosifov

Let $A$ be a random $m\times n$ matrix over the finite field $F_q$ with precisely $k$ non-zero entries per row and let $y\in F_q^m$ be a random vector chosen independently of $A$. We identify the threshold $m/n$ up to which the linear…

组合数学 · 数学 2022-07-28 Peter Ayre , Amin Coja-Oghlan , Pu Gao , Noëla Müller

Given $k$ collections of 2SAT clauses on the same set of variables $V$, can we find one assignment that satisfies a large fraction of clauses from each collection? We consider such simultaneous constraint satisfaction problems, and design…

数据结构与算法 · 计算机科学 2014-07-30 Amey Bhangale , Swastik Kopparty , Sushant Sachdeva

We introduce the problem of finding a satisfying assignment to a CNF formula that must further belong to a prescribed input subspace. Equivalent formulations of the problem include finding a point outside a union of subspaces (the…

数据结构与算法 · 计算机科学 2021-08-16 Vikraman Arvind , Venkatesan Guruswami