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The dynamics of ecosystem collapse are fundamental to determining how and why biological communities change through time, as well as the potential effects of extinctions on ecosystems. Here we integrate depictions of mammals from Egyptian…

Here we present extinction, extirpation and coexistence conditions where / when two communities combine. We consider one specific model where two communities coalesce, and another model where the communities coexist side by side, blending…

种群与进化 · 定量生物学 2025-01-14 Martin Heidelman , Dervis Can Vural

Ecosystems dynamics is often considered as driven by a coupling of species' resource consumption and its population size dynamics. Such resource-population dynamics is captured by MacArthur-type models. One biologically relevant feature…

种群与进化 · 定量生物学 2023-07-10 Elena Bellavere , Christian H. S. Hamster , Joshua A. Dijksman

We introduce a model of biological evolution where species evolve in response to biotic interactions and a fluctuating environmental stress. The species may either become extinct or mutate to acquire a new fitness value when the effective…

统计力学 · 物理学 2012-12-19 Debarshee Bagchi , P. K. Mohanty

Motivated by the results of recent laboratory experiments (Yoshida et al. Nature, 424, 303-306 (2003)) as well as many earlier field observations that evolutionary changes can take place in ecosystems over relatively short ecological time…

种群与进化 · 定量生物学 2007-05-23 Debashish Chowdhury , Dietrich Stauffer

Joint species distribution models are popular in ecology for modeling covariate effects on species occurrence, while characterizing cross-species dependence. Data consist of multivariate binary indicators of the occurrences of different…

统计方法学 · 统计学 2025-07-08 Federica Stolf , David B. Dunson

We introduce the Webworld model, which links together the ecological modelling of food web structure with the evolutionary modelling of speciation and extinction events. The model describes dynamics of ecological communities on an…

adap-org · 物理学 2007-05-23 Guido Caldarelli , Paul G. Higgs , Alan J. McKane

A new model ecosystem consisting of many interacting species is introduced. The species are connected through a random matrix with a given connectivity. It is shown that the system is organized close to a boundary of marginal stability in…

adap-org · 物理学 2007-05-23 Ricard V. Sole , David Alonso , Alan McKane

A nearby supernova (SN) explosion could have negatively influenced life on Earth, maybe even been responsible for mass extinctions. Mass extinction poses a significant extinction of numerous species on Earth, as recorded in the…

地球与行星天体物理 · 物理学 2018-04-25 Gunther Korschinek

Biodiversity and extinction are central issues in evolution. Dynamical balance among different species in ecosystems is often described by deterministic replicator equations with moderate success. However, fluctuations are inevitable,…

种群与进化 · 定量生物学 2014-11-25 Tsung-Cheng Lu , Yi-Ko Chen , Hsiu-Hau Lin , Chun-Chung-Chen

Models of many-species ecosystems, such as the Lotka-Volterra and replicator equations, suggest that these systems generically exhibit near-extinction processes, where population sizes go very close to zero for some time before rebounding,…

统计力学 · 物理学 2023-03-15 Thibaut Arnoulx de Pirey , Guy Bunin

The basic mechanics of evolution have been understood since Darwin. But debate continues over whether macroevolutionary phenomena are driven primary by the fitness structure of genotype space or by ecological interaction. In this paper we…

种群与进化 · 定量生物学 2012-10-22 David V. Foster , Mary M. Rorick , Tanja Gesell , Laura Feeney , Jacob G. Foster

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

适应与自组织系统 · 物理学 2012-08-31 Andrzej Pekalski , Marcel Ausloos

We introduce a simple computational model that, with a microscopic dynamics driven by natural selection and mutation alone, allows the description of true speciation events. A statistical analysis of the so generated evolutionary tree…

种群与进化 · 定量生物学 2009-11-11 V. Schwammle , E. Brigatti

The extinction time of an isolated population can be exponentially reduced by a periodic modulation of its environment. We investigate this effect using, as an example, a stochastic branching-annihilation process with a time-dependent…

统计力学 · 物理学 2014-08-06 Michael Assaf , Alex Kamenev , Baruch Meerson

The question of whether a population will persist or go extinct is of key interest throughout ecology and biology. Various mathematical techniques allow us to generate knowledge regarding individual behaviour, which can be analysed to…

种群与进化 · 定量生物学 2021-04-28 Stuart T. Johnston , Matthew J. Simpson , Edmund J. Crampin

Dynamical mechanisms that can stabilize the coexistence or diversity in biology are generally of fundamental interest. In contrast to many two-strategy evolutionary games, games with three strategies and cyclic dominance like the…

种群与进化 · 定量生物学 2010-03-15 Markus Schütt , Jens Christian Claussen

We consider a stochastic version of the basic predator-prey differential equation model. The model, which contains a parameter \omega which represents the number of individuals for one unit of prey -- If x denotes the quantity of prey in…

动力系统 · 数学 2011-11-29 Fabien Campillo , Claude Lobry

We consider a cyclically competing species model on a ring with global mixing at finite rate, which corresponds to the well-known Lotka-Volterra equation in the limit of infinite mixing rate. Within a perturbation analysis of the model from…

种群与进化 · 定量生物学 2017-03-28 Cilie W. Feldager , Namiko Mitarai , Hiroki Ohta

The Galaxy and the stars in it form a hierarchical system, such that the properties of individual stars are influenced by those of the Galaxy. Here, an approach is described which uses hierarchical Bayesian models to simultaneously and…

星系天体物理 · 物理学 2015-06-11 S. E. Sale