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Given a database schema, Text-to-SQL aims to translate a natural language question into the corresponding SQL query. Under the setup of cross-domain, traditional semantic parsing models struggle to adapt to unseen database schemas. To…

计算与语言 · 计算机科学 2021-04-15 Zhi Chen , Lu Chen , Yanbin Zhao , Ruisheng Cao , Zihan Xu , Su Zhu , Kai Yu

OLAF (Open Life Science Analysis Framework) is an open-source platform that enables researchers to perform bioinformatics analyses using natural language. By combining large language models (LLMs) with a modular agent-pipe-router…

定量方法 · 定量生物学 2025-04-14 Dylan Riffle , Nima Shirooni , Cody He , Manush Murali , Sovit Nayak , Rishikumar Gopalan , Diego Gonzalez Lopez

Machine learning about language can be improved by supplying it with specific knowledge and sources of external information. We present here a new version of the linked open data resource ConceptNet that is particularly well suited to be…

计算与语言 · 计算机科学 2018-12-12 Robyn Speer , Joshua Chin , Catherine Havasi

Graph representation learning is a fundamental task in various applications that strives to learn low-dimensional embeddings for nodes that can preserve graph topology information. However, many existing methods focus on static graphs while…

机器学习 · 计算机科学 2020-11-09 Jingxin Liu , Chang Xu , Chang Yin , Weiqiang Wu , You Song

The Model Context Protocol (MCP) is emerging as a common interface connecting large language models (LLMs) with external services. Remote deployments are becoming increasingly important as agents connect to user-linked online services, such…

密码学与安全 · 计算机科学 2026-05-22 Huijun Zhou , Xiaohan Zhang , Haozhe Zhang , Haoyang Zhang , Mi Zhang , Min Yang

In financial markets, Graph Neural Networks have been successfully applied to modeling relational data, effectively capturing nonlinear inter-stock dependencies. Yet, existing models often fail to efficiently propagate messages during…

机器学习 · 计算机科学 2025-10-14 Amber Li , Aruzhan Abil , Juno Marques Oda

Predicting diseases solely from patient-side information, such as demographics and self-reported symptoms, has attracted significant research attention due to its potential to enhance patient awareness, facilitate early healthcare…

人工智能 · 计算机科学 2025-12-10 Yibowen Zhao , Yinan Zhang , Zhixiang Su , Lizhen Cui , Chunyan Miao

The integration of multi-omic data is pivotal for understanding complex diseases, but its high dimensionality and noise present significant challenges. Graph Neural Networks (GNNs) offer a robust framework for analyzing large-scale…

定量方法 · 定量生物学 2024-12-23 Heming Zhang , Di Huang , Yixin Chen , Fuhai Li

Bridging natural language and structured query languages is a long-standing challenge in the database community. While recent advances in language models have shown promise in this direction, existing solutions often rely on large-scale…

Knowledge graphs represent real-world entities and their relations in a semantically-rich structure supported by ontologies. Exploring this data with machine learning methods often relies on knowledge graph embeddings, which produce latent…

机器学习 · 计算机科学 2023-06-23 Rita T. Sousa , Sara Silva , Catia Pesquita

Deep neural networks have achieved remarkable performance in various text-based tasks but often lack interpretability, making them less suitable for applications where transparency is critical. To address this, we propose ProtoLens, a novel…

计算与语言 · 计算机科学 2024-10-25 Bowen Wei , Ziwei Zhu

LexNLP is an open source Python package focused on natural language processing and machine learning for legal and regulatory text. The package includes functionality to (i) segment documents, (ii) identify key text such as titles and…

计算与语言 · 计算机科学 2018-06-12 Michael J Bommarito , Daniel Martin Katz , Eric M Detterman

Within clinical, biomedical, and translational science, an increasing number of projects are adopting graphs for knowledge representation. Graph-based data models elucidate the interconnectedness between core biomedical concepts, enable…

Using natural language processing (NLP) technologies to develop medical chatbots makes the diagnosis of the patient more convenient and efficient, which is a typical application in healthcare AI. Because of its importance, lots of research…

计算与语言 · 计算机科学 2023-12-06 Ke Liang , Sifan Wu , Jiayi Gu

Predicting the future paths of an agent's neighbors accurately and in a timely manner is central to the autonomous applications for collision avoidance. Conventional approaches, e.g., LSTM-based models, take considerable computational costs…

计算机视觉与模式识别 · 计算机科学 2021-03-11 Chengxin Wang , Shaofeng Cai , Gary Tan

Despite improved digital access to scholarly knowledge in recent decades, scholarly communication remains exclusively document-based. In this form, scholarly knowledge is hard to process automatically. In this paper, we present the first…

Large Language Models (LLMs) increasingly rely on external tools to perform complex, realistic tasks, yet their ability to utilize the rapidly expanding Model Contextual Protocol (MCP) ecosystem remains limited. Existing MCP research covers…

人工智能 · 计算机科学 2026-04-17 Wenhao Wang , Peizhi Niu , Zhao Xu , Zhaoyu Chen , Jian Du , Yaxin Du , Xianghe Pang , Keduan Huang , Yanfeng Wang , Qiang Yan , Siheng Chen

Knowledge Graphs (KG) act as a great tool for holding distilled information from large natural language text corpora. The problem of natural language querying over knowledge graphs is essential for the human consumption of this information.…

机器学习 · 计算机科学 2021-12-22 Aayushee Gupta , K. M. Annervaz , Ambedkar Dukkipati , Shubhashis Sengupta

Vision-language models are pre-trained by aligning image-text pairs in a common space to deal with open-set visual concepts. To boost the transferability of the pre-trained models, recent works adopt fixed or learnable prompts, i.e.,…

计算机视觉与模式识别 · 计算机科学 2024-03-26 Jiangmeng Li , Wenyi Mo , Wenwen Qiang , Bing Su , Changwen Zheng , Hui Xiong , Ji-Rong Wen

Protein Contact Network (PCN) is a powerful tool for analysing the structure and function of proteins. In particular, PCN has been used for disclosing the molecular features of allosteric regulation through PCN clustering. Such analysis is…

定量方法 · 定量生物学 2022-01-18 Pietro Hiram Guzzi , Luisa Di Paola , Alessandro Giuliani , Pierangelo Veltri