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Following the global COVID-19 pandemic, the number of scientific papers studying the virus has grown massively, leading to increased interest in automated literate review. We present a clinical text mining system that improves on previous…

计算与语言 · 计算机科学 2020-12-09 Veysel Kocaman , David Talby

Contrastive Language-Image Pretraining (CLIP) has demonstrated strong generalization for vision-language tasks in computer vision and medical domains, yet its text encoder accepts only up to 77 tokens, which limits its ability to represent…

计算机视觉与模式识别 · 计算机科学 2025-11-19 Xiaoyang Wei , Camille Kurtz , Florence Cloppet

Social telehealth has revolutionized healthcare by enabling patients to share symptoms and receive medical consultations remotely. Users frequently post symptoms on social media and online health platforms, generating a vast repository of…

计算与语言 · 计算机科学 2025-02-04 Malak Mohamed , Rokaia Emad , Ali Hamdi

Biomedical entity linking is the task of identifying mentions of biomedical concepts in text documents and mapping them to canonical entities in a target thesaurus. Recent advancements in entity linking using BERT-based models follow a…

计算与语言 · 计算机科学 2021-03-10 Rajarshi Bhowmik , Karl Stratos , Gerard de Melo

Domain-specific text embeddings are critical for clinical natural language processing, yet systematic comparisons across model architectures remain limited. This study evaluates ten transformer-based embedding models adapted for cardiology…

计算与语言 · 计算机科学 2025-11-26 Richard J. Young , Alice M. Matthews

We present MultiCoNER, a large multilingual dataset for Named Entity Recognition that covers 3 domains (Wiki sentences, questions, and search queries) across 11 languages, as well as multilingual and code-mixing subsets. This dataset is…

计算与语言 · 计算机科学 2022-09-01 Shervin Malmasi , Anjie Fang , Besnik Fetahu , Sudipta Kar , Oleg Rokhlenko

Large-scale cross-lingual language models (LM), such as mBERT, Unicoder and XLM, have achieved great success in cross-lingual representation learning. However, when applied to zero-shot cross-lingual transfer tasks, most existing methods…

计算与语言 · 计算机科学 2020-12-16 Yuwei Fang , Shuohang Wang , Zhe Gan , Siqi Sun , Jingjing Liu

MedER refers to the identification of medical entities. It is crucial for extracting structured clinical information from unstructured medical text. Many existing systems rely on transformer-based models, which are computationally expensive…

计算与语言 · 计算机科学 2026-05-26 Peyal Saha , Ahsanul Haque Hasib , Shoumik Barman Polok

This paper introduces novel methodologies for the Natural Language Inference for Clinical Trials (NLI4CT) task. We present TLDR (T5-generated clinical-Language summaries for DeBERTa Report Analysis) which incorporates T5-model generated…

计算与语言 · 计算机科学 2024-04-16 Spandan Das , Vinay Samuel , Shahriar Noroozizadeh

Extracting detailed clinical information from free-text medical narratives remains a practical challenge for researchers and healthcare systems. Terminology for immune-mediated and infectious diseases is especially inconsistent across…

计算与语言 · 计算机科学 2026-05-29 Veysel Kocaman , Gursev Pirge , Yigit Gul , Ace Vo , Zhenya Nargizyan , David Talby

This paper describes our submission on the COVID-19 literature annotation task at Biocreative VII. We proposed an approach that exploits the knowledge of the globally non-optimal weights, usually rejected, to build a rich representation of…

计算与语言 · 计算机科学 2021-11-12 Loïc Rakotoson , Charles Letaillieur , Sylvain Massip , Fréjus Laleye

We introduce JobBERT-V3, a contrastive learning-based model for cross-lingual job title matching. Building on the state-of-the-art monolingual JobBERT-V2, our approach extends support to English, German, Spanish, and Chinese by leveraging…

计算与语言 · 计算机科学 2025-07-30 Jens-Joris Decorte , Matthias De Lange , Jeroen Van Hautte

We present a transformer-based multimodal framework for generating clinically relevant captions for MRI scans. Our system combines a DEiT-Small vision transformer as an image encoder, MediCareBERT for caption embedding, and a custom…

图像与视频处理 · 电气工程与系统科学 2025-11-03 Yogesh Thakku Suresh , Vishwajeet Shivaji Hogale , Luca-Alexandru Zamfira , Anandavardhana Hegde

Multilingual Large Language Models (LLMs) can process many languages, yet how they internally represent this diversity remains unclear. Do they form shared multilingual representations with language-specific decoding, and if so, why does…

计算与语言 · 计算机科学 2026-02-10 Abir Harrasse , Florent Draye , Punya Syon Pandey , Zhijing Jin , Bernhard Schölkopf

Concept Bottleneck Models (CBMs) are a prominent framework for interpretable AI that map learned visual features to a set of meaningful concepts for task-specific downstream predictions. Their sequential structure enhances transparency by…

As Vision-Language Models (VLMs) increasingly gain traction in medical applications, clinicians are progressively expecting AI systems not only to generate textual diagnoses but also to produce corresponding medical images that integrate…

计算机视觉与模式识别 · 计算机科学 2025-11-19 Junjie Yang , Yuhao Yan , Gang Wu , Yuxuan Wang , Ruoyu Liang , Xinjie Jiang , Xiang Wan , Fenglei Fan , Yongquan Zhang , Feiwei Qin , Changmiao Wang

The linking of clinical entities is a crucial part of extracting structured information from clinical texts. It is the process of assigning a code from a medical ontology or classification to a phrase in the text. The International…

计算与语言 · 计算机科学 2025-09-08 Sylvia Vassileva , Ivan Koychev , Svetla Boytcheva

The clinical named entity recognition (CNER) task seeks to locate and classify clinical terminologies into predefined categories, such as diagnostic procedure, disease disorder, severity, medication, medication dosage, and sign symptom.…

计算与语言 · 计算机科学 2021-06-25 Yichao Zhou , Chelsea Ju , J. Harry Caufield , Kevin Shih , Calvin Chen , Yizhou Sun , Kai-Wei Chang , Peipei Ping , Wei Wang

Mainstream Word Sense Disambiguation (WSD) approaches have employed BERT to extract semantics from both context and definitions of senses to determine the most suitable sense of a target word, achieving notable performance. However, there…

人工智能 · 计算机科学 2025-06-03 Linhan Xia , Mingzhan Yang , Guohui Yuan , Shengnan Tao , Yujing Qiu , Guo Yu , Kai Lei

Recent progress in neural information retrieval has demonstrated large gains in effectiveness, while often sacrificing the efficiency and interpretability of the neural model compared to classical approaches. This paper proposes ColBERTer,…

信息检索 · 计算机科学 2022-03-25 Sebastian Hofstätter , Omar Khattab , Sophia Althammer , Mete Sertkan , Allan Hanbury