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GraphSPME is an open source Python, R and C++ header-only package implement-ing non-parametric sparse precision matrix estimation along with asymptotic Stein-type shrinkage estimation of the covariance matrix. The user defines a potential…

统计计算 · 统计学 2022-05-17 Berent Ånund Strømnes Lunde , Feda Curic , Sondre Sortland

Nonparametric varying coefficient (NVC) models are useful for modeling time-varying effects on responses that are measured repeatedly for the same subjects. When the number of covariates is moderate or large, it is desirable to perform…

统计方法学 · 统计学 2023-09-19 Ray Bai , Mary R. Boland , Yong Chen

Modeling sparse data such as microbiome and transcriptomics (RNA-seq) data is very challenging due to the exceeded number of zeros and skewness of the distribution. Many probabilistic models have been used for modeling sparse data,…

统计方法学 · 统计学 2021-12-30 Hani Aldirawi , Jie Yang

This work focuses on the issue of variable selection in functional regression. Unlike most work in this framework, our approach does not select isolated points in the definition domain of the predictors, nor does it rely on the expansion of…

统计理论 · 数学 2018-03-05 Victor Picheny , Rémi Servien , Nathalie Villa-Vialaneix

We develop an algorithm for model selection which allows for the consideration of a combinatorially large number of candidate models governing a dynamical system. The innovation circumvents a disadvantage of standard model selection which…

数据分析、统计与概率 · 物理学 2017-11-01 Niall M. Mangan , J. Nathan Kutz , Steven L. Brunton , Joshua L. Proctor

Model evaluation is a critical component in supervised machine learning classification analyses. Traditional metrics do not currently incorporate case difficulty. This renders the classification results unbenchmarked for generalization.…

机器学习 · 计算机科学 2023-02-10 Adrienne Kline , Joon Lee

Smoothing of noisy sample covariances is an important component in functional data analysis. We propose a novel covariance smoothing method based on penalized splines and associated software. The proposed method is a bivariate spline…

统计方法学 · 统计学 2017-04-07 Luo Xiao , Cai Li , William Checkley , Ciprian M. Crainiceanu

By treating intervals as inseparable sets, this paper proposes sparse machine learning regressions for high-dimensional interval-valued time series. With LASSO or adaptive LASSO techniques, we develop a penalized minimum distance…

计量经济学 · 经济学 2024-11-15 Haowen Bao , Yongmiao Hong , Yuying Sun , Shouyang Wang

In large-scale genomic applications vast numbers of molecular features are scanned in order to find a small number of candidates which are linked to a particular disease or phenotype. This is a variable selection problem in the "large p,…

统计计算 · 统计学 2014-02-13 Manuela Zucknick , Sylvia Richardson

Linear mixed models (LMMs), which incorporate fixed and random effects, are key tools for analyzing heterogeneous data, such as in personalized medicine. Nowadays, this type of data is increasingly wide, sometimes containing thousands of…

机器学习 · 统计学 2026-05-15 Ryan Thompson , Matt P. Wand , Joanna J. J. Wang

Large language models possess strong chemical reasoning capabilities, making them effective molecular editors. However, property-relevant information is implicitly entangled across their dense hidden states, providing no explicit handle for…

机器学习 · 计算机科学 2026-05-12 Mingxu Zhang , Yuhan Li , Lujundong Li , Dazhong Shen , Hui Xiong , Ying Sun

Precision matrix is of significant importance in a wide range of applications in multivariate analysis. This paper considers adaptive minimax estimation of sparse precision matrices in the high dimensional setting. Optimal rates of…

统计理论 · 数学 2012-12-13 T. Tony Cai , Weidong Liu , Harrison H. Zhou

Selective rationalization aims to produce decisions along with rationales (e.g., text highlights or word alignments between two sentences). Commonly, rationales are modeled as stochastic binary masks, requiring sampling-based gradient…

计算与语言 · 计算机科学 2021-09-13 Nuno Miguel Guerreiro , André F. T. Martins

In parameter estimation problems one computes a posterior distribution over uncertain parameters defined jointly by a prior distribution, a model, and noisy data. Markov Chain Monte Carlo (MCMC) is often used for the numerical solution of…

Monte Carlo methods -- such as Markov chain Monte Carlo (MCMC) and piecewise deterministic Markov process (PDMP) samplers -- provide asymptotically exact estimators of expectations under a target distribution. There is growing interest in…

统计计算 · 统计学 2024-09-09 Adrien Corenflos , Matthew Sutton , Nicolas Chopin

We present a novel algorithm that is based on a Bayesian Markov Chain Monte Carlo (MCMC) technique for performing robust profile analysis of a data cube from either single-dish or interferometric radio telescopes. It fits a set of models…

星系天体物理 · 物理学 2019-05-22 Se-Heon Oh , Lister Staveley-Smith , Bi-Qing For

Sparse model selection is ubiquitous from linear regression to graphical models where regularization paths, as a family of estimators upon the regularization parameter varying, are computed when the regularization parameter is unknown or…

机器学习 · 统计学 2018-10-10 Chendi Huang , Yuan Yao

We consider learning a sparse pairwise Markov Random Field (MRF) with continuous-valued variables from i.i.d samples. We adapt the algorithm of Vuffray et al. (2019) to this setting and provide finite-sample analysis revealing sample…

机器学习 · 计算机科学 2020-10-29 Abhin Shah , Devavrat Shah , Gregory W. Wornell

A key quantity of interest in Bayesian inference are expectations of functions with respect to a posterior distribution. Markov Chain Monte Carlo is a fundamental tool to consistently compute these expectations via averaging samples drawn…

机器学习 · 统计学 2015-02-10 Heiko Strathmann , Dino Sejdinovic , Mark Girolami

Sufficient dimension reduction (SDR) in regression, which reduces the dimension by replacing original predictors with a minimal set of their linear combinations without loss of information, is very helpful when the number of predictors is…

统计理论 · 数学 2012-11-15 Xin Chen , Changliang Zou , R. Dennis Cook