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Rare diseases (RDs) are collectively common and affect 300 million people worldwide. Accurate phenotyping is critical for informing diagnosis and treatment, but RD phenotypes are often embedded in unstructured text and time-consuming to…

计算与语言 · 计算机科学 2024-06-28 Cathy Shyr , Yan Hu , Paul A. Harris , Hua Xu

Our knowledge of the organisation of the human brain at the population-level is yet to translate into power to predict functional differences at the individual-level, limiting clinical applications, and casting doubt on the generalisability…

Suicide remains a pressing global health crisis, with over 720,000 deaths annually and millions more affected by suicide ideation (SI) and suicide attempts (SA). Early identification of suicidality-related factors (SrFs), including SI, SA,…

Aligning physiological parameter labels with large-scale photoplethysmographic (PPG) data for deep learning is challenging and resource-intensive. While self-supervised representation learning (SSRL) can handle limited annotated data, the…

信号处理 · 电气工程与系统科学 2026-04-28 Zexing Zhang , Huimin Lu , Songzhe Ma , Jianzhong Peng , Chenglin Lin , Niya Li , Bingwang Dong

This study introduces BrainTransformers, an innovative Large Language Model (LLM) implemented using Spiking Neural Networks (SNN). Our key contributions include: (1) designing SNN-compatible Transformer components such as SNNMatmul,…

神经与进化计算 · 计算机科学 2024-10-24 Zhengzheng Tang , Eva Zhu

The growing prevalence and complexity of mental health disorders present significant challenges for accurate diagnosis and treatment, particularly in understanding the interplay between co-occurring conditions. Mental health disorders, such…

人工智能 · 计算机科学 2024-12-06 Abdelrahaman A. Hassan , Radwa J. Hanafy , Mohammed E. Fouda

We present E3C-3.0, a multilingual dataset in the medical domain, comprising clinical cases annotated with diseases and test-result relations. The dataset includes both native texts in five languages (English, French, Italian, Spanish and…

Recognizing named entities in a document is a key task in many NLP applications. Although current state-of-the-art approaches to this task reach a high performance on clean text (e.g. newswire genres), those algorithms dramatically degrade…

计算与语言 · 计算机科学 2019-06-11 Gustavo Aguilar , A. Pastor López-Monroy , Fabio A. González , Thamar Solorio

The screening of Parkinson's Disease (PD) through speech is hindered by a notable lack of publicly available datasets in different languages. This fact limits the reproducibility and further exploration of existing research. To address this…

Motivation: A perennial challenge for biomedical researchers and clinical practitioners is to stay abreast with the rapid growth of publications and medical notes. Natural language processing (NLP) has emerged as a promising direction for…

计算与语言 · 计算机科学 2021-12-16 Robert Tinn , Hao Cheng , Yu Gu , Naoto Usuyama , Xiaodong Liu , Tristan Naumann , Jianfeng Gao , Hoifung Poon

This paper introduces NeuGPT, a groundbreaking multi-modal language generation model designed to harmonize the fragmented landscape of neural recording research. Traditionally, studies in the field have been compartmentalized by signal…

计算与语言 · 计算机科学 2024-10-29 Yiqian Yang , Yiqun Duan , Hyejeong Jo , Qiang Zhang , Renjing Xu , Oiwi Parker Jones , Xuming Hu , Chin-teng Lin , Hui Xiong

Cardiovascular diseases are becoming increasingly prevalent in modern society, with a profound impact on global health and well-being. These Cardiovascular disorders are complex and multifactorial, influenced by genetic predispositions,…

计算与语言 · 计算机科学 2025-10-23 Kailai Yang , Yan Leng , Xin Zhang , Tianlin Zhang , Paul Thompson , Bernard Keavney , Maciej Tomaszewski , Sophia Ananiadou

Human phenotype-gene relations are fundamental to fully understand the origin of some phenotypic abnormalities and their associated diseases. Biomedical literature is the most comprehensive source of these relations, however, we need…

计算与语言 · 计算机科学 2020-04-14 Diana Sousa , Andre Lamurias , Francisco M. Couto

Background: Electronic Health Records hold detailed longitudinal information about each patient's health status and general clinical history, a large portion of which is stored within the unstructured text. Existing approaches focus mostly…

The scale, variety, and quantity of publicly-available NLP datasets has grown rapidly as researchers propose new tasks, larger models, and novel benchmarks. Datasets is a community library for contemporary NLP designed to support this…

In the era of increasingly sophisticated natural language processing (NLP) systems, large language models (LLMs) have demonstrated remarkable potential for diverse applications, including tasks requiring nuanced textual understanding and…

计算与语言 · 计算机科学 2025-05-16 Poli Apollinaire Nemkova , Solomon Ubani , Mark V. Albert

Recent advances in large language models (LLMs) have substantially improved natural language processing (NLP) applications. However, these models often inherit and amplify biases present in their training data. Although several datasets…

计算与语言 · 计算机科学 2026-02-20 Shaina Raza , Mizanur Rahman , Michael R. Zhang

We test whether NLP datasets created with Large Language Models (LLMs) contain annotation artifacts and social biases like NLP datasets elicited from crowd-source workers. We recreate a portion of the Stanford Natural Language Inference…

计算与语言 · 计算机科学 2025-03-10 Grace Proebsting , Adam Poliak

Large Language Models (LLMs), particularly those similar to ChatGPT, have significantly influenced the field of Natural Language Processing (NLP). While these models excel in general language tasks, their performance in domain-specific…

计算与语言 · 计算机科学 2024-01-02 Omid Rohanian , Mohammadmahdi Nouriborji , David A. Clifton

We propose a matrix factorization technique that decomposes the resting state fMRI (rs-fMRI) correlation matrices for a patient population into a sparse set of representative subnetworks, as modeled by rank one outer products. The…

信号处理 · 电气工程与系统科学 2018-07-26 Niharika Shimona D'Souza , Mary Beth Nebel , Nicholas Wymbs , Stewart Mostofsky , Archana Venkataraman