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The design of genetic networks with specific functions is one of the major goals of synthetic biology. However, constructing biological devices that work "as required" remains challenging, while the cost of uncovering flawed designs…

系统与控制 · 计算机科学 2011-11-10 Boyan Yordanov , Calin Belta

The ability of to explain neural network decisions goes hand in hand with their safe deployment. Several methods have been proposed to highlight features important for a given network decision. However, there is no consensus on how to…

计算机视觉与模式识别 · 计算机科学 2020-03-23 Agnieszka Grabska-Barwińska

To interpret deep networks, one main approach is to associate neurons with human-understandable concepts. However, existing methods often ignore the inherent relationships of different concepts (e.g., dog and cat both belong to animals),…

计算机视觉与模式识别 · 计算机科学 2022-03-29 Andong Wang , Wei-Ning Lee , Xiaojuan Qi

We present a general information theoretic approach for identifying functional subgraphs in complex networks where the dynamics of each node are observable. We show that the uncertainty in the state of each node can be expressed as a sum of…

神经元与认知 · 定量生物学 2008-07-31 Luis M. A. Bettencourt , Vadas Gintautas , Michael I. Ham

We propose a new approach to promote safety in classification tasks with established concepts. Our approach -- called a conceptual safeguard -- acts as a verification layer for models that predict a target outcome by first predicting the…

机器学习 · 计算机科学 2024-11-08 Hailey Joren , Charles Marx , Berk Ustun

Recently, deep feedforward neural networks have achieved considerable success in modeling biological sensory processing, in terms of reproducing the input-output map of sensory neurons. However, such models raise profound questions about…

神经元与认知 · 定量生物学 2019-12-16 Hidenori Tanaka , Aran Nayebi , Niru Maheswaranathan , Lane McIntosh , Stephen A. Baccus , Surya Ganguli

Drawing inspiration from our human brain that designs different neurons for different tasks, recent advances in deep learning have explored modifying a network's neurons to develop so-called task-driven neurons. Prototyping task-driven…

机器学习 · 计算机科学 2026-02-17 Hanyu Pei , Jing-Xiao Liao , Qibin Zhao , Ting Gao , Shijun Zhang , Xiaoge Zhang , Feng-Lei Fan

We show a proof of principle for warping, a method to interpret the inner working of neural networks in the context of gene expression analysis. Warping is an efficient way to gain insight to the inner workings of neural nets and make them…

基因组学 · 定量生物学 2017-08-17 Trofimov Assya , Lemieux Sebastien , Perreault Claude

Interpretability is crucial for ensuring RL systems align with human values. However, it remains challenging to achieve in complex decision making domains. Existing methods frequently attempt interpretability at the level of fundamental…

机器学习 · 计算机科学 2025-06-03 Anna Soligo , Pietro Ferraro , David Boyle

Neural networks have achieved remarkable success across various fields. However, the lack of interpretability limits their practical use, particularly in critical decision-making scenarios. Post-hoc interpretability, which provides…

机器学习 · 计算机科学 2025-11-21 Yang Ji , Ying Sun , Yuting Zhang , Zhigaoyuan Wang , Yuanxin Zhuang , Zheng Gong , Dazhong Shen , Chuan Qin , Hengshu Zhu , Hui Xiong

Linear classifier probes are frequently utilized to better understand how neural networks function. Researchers have approached the problem of determining unit importance in neural networks by probing their learned, internal…

机器学习 · 计算机科学 2022-11-09 Lucas Hayne , Abhijit Suresh , Hunar Jain , Rahul Kumar , R. McKell Carter

This paper addresses two main challenges facing systems neuroscience today: understanding the nature and function of a) cortical feedback between sensory areas and b) correlated variability. Starting from the old idea of perception as…

神经元与认知 · 定量生物学 2015-11-20 Ralf M. Haefner , Pietro Berkes , József Fiser

Deep Neural Networks (DNNs) have advanced applications in domains such as healthcare, autonomous systems, and scene understanding, yet the internal semantics of their hidden neurons remain poorly understood. Prior work introduced a Concept…

计算机视觉与模式识别 · 计算机科学 2026-03-03 Moumita Sen Sarma , Samatha Ereshi Akkamahadevi , Pascal Hitzler

We study the problem of explaining a rich class of behavioral properties of deep neural networks. Distinctively, our influence-directed explanations approach this problem by peering inside the network to identify neurons with high influence…

机器学习 · 计算机科学 2018-11-14 Klas Leino , Shayak Sen , Anupam Datta , Matt Fredrikson , Linyi Li

Deep neural networks (DNNs) are the workhorses of deep learning, which constitutes the state of the art in numerous application domains. However, DNN-based decision rules are notoriously prone to poor generalization, i.e., may prove…

机器学习 · 计算机科学 2023-05-11 Guy Amir , Osher Maayan , Tom Zelazny , Guy Katz , Michael Schapira

The neural mechanism of memory has a very close relation with the problem of representation in artificial intelligence. In this paper a computational model was proposed to simulate the network of neurons in brain and how they process…

神经元与认知 · 定量生物学 2020-12-02 Hui Wei

Deep neural networks have demonstrated remarkable performance across various domains, yet their decision-making processes remain opaque. Although many explanation methods are dedicated to bringing the obscurity of DNNs to light, they…

计算机视觉与模式识别 · 计算机科学 2025-12-17 Kanglong Fan , Yunqiao Yang , Chen Ma

A method of discovering how neurons are connected to process information is presented here: Design a simple logic circuit that can perform a single, biologically advantageous function. Engineering concepts can be helpful in choosing the…

神经元与认知 · 定量生物学 2025-03-07 Lane Yoder

Existing explanation methods for image classification struggle to provide faithful and plausible explanations. This paper addresses this issue by proposing a post-hoc natural language explanation method that can be applied to any CNN-based…

人工智能 · 计算机科学 2025-03-19 Adam Wojciechowski , Mateusz Lango , Ondrej Dusek

Deep neural networks are becoming more and more popular due to their revolutionary success in diverse areas, such as computer vision, natural language processing, and speech recognition. However, the decision-making processes of these…

计算与语言 · 计算机科学 2021-10-15 Oana-Maria Camburu