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Quantum machine learning (QML) requires powerful, flexible and efficiently trainable models to be successful in solving challenging problems. We introduce density quantum neural networks, a model family that prepares mixtures of trainable…

With the emergence of Multimodal Large Language Models (MLLMs), hundreds of benchmarks have been developed to ensure the reliability of MLLMs in downstream tasks. However, the evaluation mechanism itself may not be reliable. For developers…

计算与语言 · 计算机科学 2025-03-14 Chunyi Li , Xiaozhe Li , Zicheng Zhang , Yuan Tian , Ziheng Jia , Xiaohong Liu , Xiongkuo Min , Jia Wang , Haodong Duan , Kai Chen , Guangtao Zhai

Accurate prediction of drug-target binding affinity can accelerate drug discovery by prioritizing promising compounds before costly wet-lab screening. While deep learning has advanced this task, most models fuse ligand and protein…

机器学习 · 计算机科学 2025-09-26 Mohammadsaleh Refahi , Bahrad A. Sokhansanj , James R. Brown , Gail Rosen

Classification is a fundamental task in machine learning. While conventional methods-such as binary, multiclass, and multi-label classification-are effective for simpler problems, they may not adequately address the complexities of some…

Instruction following is one of the fundamental capabilities of large language models (LLMs). As the ability of LLMs is constantly improving, they have been increasingly applied to deal with complex human instructions in real-world…

Chemistry research has both high material and computational costs to conduct experiments. Institutions thus consider chemical data to be valuable and there have been few efforts to construct large public datasets for machine learning.…

机器学习 · 计算机科学 2022-05-10 Wei Zhu , Jiebo Luo , Andrew White

Medical data poses a daunting challenge for AI algorithms: it exists in many different modalities, experiences frequent distribution shifts, and suffers from a scarcity of examples and labels. Recent advances, including transformers and…

One of the fundamental tasks in understanding genomics is the problem of predicting Transcription Factor Binding Sites (TFBSs). With more than hundreds of Transcription Factors (TFs) as labels, genomic-sequence based TFBS prediction is a…

机器学习 · 计算机科学 2017-11-13 Jack Lanchantin , Arshdeep Sekhon , Ritambhara Singh , Yanjun Qi

The efficient exploration of chemical space to design molecules with intended properties enables the accelerated discovery of drugs, materials, and catalysts, and is one of the most important outstanding challenges in chemistry. Encouraged…

计算工程、金融与科学 · 计算机科学 2023-10-12 AkshatKumar Nigam , Robert Pollice , Gary Tom , Kjell Jorner , John Willes , Luca A. Thiede , Anshul Kundaje , Alan Aspuru-Guzik

The eXtreme Multi-label text Classification(XMC) refers to training a classifier that assigns a text sample with relevant labels from an extremely large-scale label set (e.g., millions of labels). We propose MatchXML, an efficient…

计算与语言 · 计算机科学 2024-03-12 Hui Ye , Rajshekhar Sunderraman , Shihao Ji

In this paper, we present an Adaptive Ensemble Learning framework that aims to boost the performance of deep neural networks by intelligently fusing features through ensemble learning techniques. The proposed framework integrates ensemble…

人工智能 · 计算机科学 2023-04-07 Neelesh Mungoli

The boom of DL technology leads to massive DL models built and shared, which facilitates the acquisition and reuse of DL models. For a given task, we encounter multiple DL models available with the same functionality, which are considered…

软件工程 · 计算机科学 2021-03-10 Linghan Meng , Yanhui Li , Lin Chen , Zhi Wang , Di Wu , Yuming Zhou , Baowen Xu

Motivation: Drug combination is a sensible strategy for disease treatment by improving the efficacy and reducing concomitant side effects. Due to the large number of possible combinations among candidate compounds, exhaustive screening is…

定量方法 · 定量生物学 2020-02-26 Liang Yu , Mingfei Xia , Lin Gao

Feature selection of high-dimensional labeled data with limited observations is critical for making powerful predictive modeling accessible, scalable, and interpretable for domain experts. Spectroscopy data, which records the interaction…

机器学习 · 计算机科学 2022-02-10 Frantishek Akulich , Hadis Anahideh , Manaf Sheyyab , Dhananjay Ambre

Measurements are fundamental to knowledge creation in science, enabling consistent sharing of findings and serving as the foundation for scientific discovery. As machine learning systems increasingly transform scientific fields, the…

材料科学 · 物理学 2025-05-07 Nawaf Alampara , Mara Schilling-Wilhelmi , Kevin Maik Jablonka

Many scientific models are composed of multiple discrete components, and scientists often make heuristic decisions about which components to include. Bayesian inference provides a mathematical framework for systematically selecting model…

机器学习 · 计算机科学 2024-05-31 Cornelius Schröder , Jakob H. Macke

With the rapid development of Deep Learning, more and more applications on the cloud and edge tend to utilize large DNN (Deep Neural Network) models for improved task execution efficiency as well as decision-making quality. Due to memory…

机器学习 · 计算机科学 2024-07-02 Jingran Shen , Nikos Tziritas , Georgios Theodoropoulos

Traditional Collaborative Filtering (CF) based methods are applied to understand the personal preferences of users/customers for items or products from the rating matrix. Usually, the rating matrix is sparse in nature. So there are some…

信息检索 · 计算机科学 2022-10-12 Supriyo Mandal , Abyayananda Maiti

Accelerated discovery with machine learning (ML) has begun to provide the advances in efficiency needed to overcome the combinatorial challenge of computational materials design. Nevertheless, ML-accelerated discovery both inherits the…

材料科学 · 物理学 2022-05-09 Chenru Duan , Fang Liu , Aditya Nandy , Heather J. Kulik

Large language model (LLM) evaluation is increasingly costly, prompting interest in methods that speed up evaluation by shrinking benchmark datasets. Benchmark prediction (also called efficient LLM evaluation) aims to select a small subset…

机器学习 · 计算机科学 2025-06-10 Guanhua Zhang , Florian E. Dorner , Moritz Hardt