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Transformer architecture has emerged to be successful in a number of natural language processing tasks. However, its applications to medical vision remain largely unexplored. In this study, we present UTNet, a simple yet powerful hybrid…

计算机视觉与模式识别 · 计算机科学 2021-09-29 Yunhe Gao , Mu Zhou , Dimitris Metaxas

Medical image segmentation is essential for clinical diagnosis and treatment planning. Although transformer-based methods have achieved remarkable results, their high computational cost hinders clinical deployment. To address this issue, we…

计算机视觉与模式识别 · 计算机科学 2025-11-18 Yaxuan Jiao , Qing Xu , Yuxiang Luo , Xiangjian He , Zhen Chen , Wenting Duan

Fully Convolutional Neural Networks (FCNNs) with contracting and expanding paths have shown prominence for the majority of medical image segmentation applications since the past decade. In FCNNs, the encoder plays an integral role by…

图像与视频处理 · 电气工程与系统科学 2021-10-12 Ali Hatamizadeh , Yucheng Tang , Vishwesh Nath , Dong Yang , Andriy Myronenko , Bennett Landman , Holger Roth , Daguang Xu

Medical image segmentation plays a crucial role in advancing healthcare systems for disease diagnosis and treatment planning. The u-shaped architecture, popularly known as U-Net, has proven highly successful for various medical image…

计算机视觉与模式识别 · 计算机科学 2023-10-13 Jieneng Chen , Jieru Mei , Xianhang Li , Yongyi Lu , Qihang Yu , Qingyue Wei , Xiangde Luo , Yutong Xie , Ehsan Adeli , Yan Wang , Matthew Lungren , Lei Xing , Le Lu , Alan Yuille , Yuyin Zhou

Medical image segmentation is an essential prerequisite for developing healthcare systems, especially for disease diagnosis and treatment planning. On various medical image segmentation tasks, the u-shaped architecture, also known as U-Net,…

计算机视觉与模式识别 · 计算机科学 2021-02-09 Jieneng Chen , Yongyi Lu , Qihang Yu , Xiangde Luo , Ehsan Adeli , Yan Wang , Le Lu , Alan L. Yuille , Yuyin Zhou

In the past few years, convolutional neural networks (CNNs) have achieved milestones in medical image analysis. Especially, the deep neural networks based on U-shaped architecture and skip-connections have been widely applied in a variety…

图像与视频处理 · 电气工程与系统科学 2021-05-13 Hu Cao , Yueyue Wang , Joy Chen , Dongsheng Jiang , Xiaopeng Zhang , Qi Tian , Manning Wang

In recent years, significant progress has been made in the medical image analysis domain using convolutional neural networks (CNNs). In particular, deep neural networks based on a U-shaped architecture (UNet) with skip connections have been…

图像与视频处理 · 电气工程与系统科学 2024-10-16 Vamsi Krishna Vasa , Wenhui Zhu , Xiwen Chen , Peijie Qiu , Xuanzhao Dong , Yalin Wang

Semantic segmentation of brain tumors is a fundamental medical image analysis task involving multiple MRI imaging modalities that can assist clinicians in diagnosing the patient and successively studying the progression of the malignant…

图像与视频处理 · 电气工程与系统科学 2022-01-05 Ali Hatamizadeh , Vishwesh Nath , Yucheng Tang , Dong Yang , Holger Roth , Daguang Xu

Transformer-based neural networks have surpassed promising performance on many biomedical image segmentation tasks due to a better global information modeling from the self-attention mechanism. However, most methods are still designed for…

计算机视觉与模式识别 · 计算机科学 2023-02-02 Zheyuan Zhang , Ulas Bagci

Recent advances in transformer-based models have drawn attention to exploring these techniques in medical image segmentation, especially in conjunction with the U-Net model (or its variants), which has shown great success in medical image…

图像与视频处理 · 电气工程与系统科学 2021-10-22 Xiangyi Yan , Hao Tang , Shanlin Sun , Haoyu Ma , Deying Kong , Xiaohui Xie

Since their emergence, Convolutional Neural Networks (CNNs) have made significant strides in medical image analysis. However, the local nature of the convolution operator may pose a limitation for capturing global and long-range…

图像与视频处理 · 电气工程与系统科学 2024-04-01 Abdul Rehman Khan , Asifullah Khan

Accurate segmentation of organs or lesions from medical images is crucial for reliable diagnosis of diseases and organ morphometry. In recent years, convolutional encoder-decoder solutions have achieved substantial progress in the field of…

图像与视频处理 · 电气工程与系统科学 2022-07-12 Bingzhi Chen , Yishu Liu , Zheng Zhang , Guangming Lu , Adams Wai Kin Kong

In the field of medical images, although various works find Swin Transformer has promising effectiveness on pixelwise dense prediction, whether pre-training these models without using extra dataset can further boost the performance for the…

计算机视觉与模式识别 · 计算机科学 2024-08-13 Xinrong Hu , Dewen Zeng , Yawen Wu , Xueyang Li , Yiyu Shi

We show that Transformer encoder architectures can be sped up, with limited accuracy costs, by replacing the self-attention sublayers with simple linear transformations that "mix" input tokens. These linear mixers, along with standard…

计算与语言 · 计算机科学 2022-05-30 James Lee-Thorp , Joshua Ainslie , Ilya Eckstein , Santiago Ontanon

This paper provides a novel 3D medical image segmentation model structure called nnY-Net. This name comes from the fact that our model adds a cross-attention module at the bottom of the U-net structure to form a Y structure. We integrate…

计算机视觉与模式识别 · 计算机科学 2025-01-03 Haixu Liu , Zerui Tao , Wenzhen Dong , Qiuzhuang Sun

Identifying biomarkers in medical images is vital for a wide range of biotech applications. However, recent Transformer and CNN based methods often struggle with variations in morphology and staining, which limits their feature extraction…

图像与视频处理 · 电气工程与系统科学 2025-04-09 Saad Wazir , Daeyoung Kim

Medical image segmentation is crucial for the development of computer-aided diagnostic and therapeutic systems, but still faces numerous difficulties. In recent years, the commonly used encoder-decoder architecture based on CNNs has been…

计算机视觉与模式识别 · 计算机科学 2023-04-25 Davoud Saadati , Omid Nejati Manzari , Sattar Mirzakuchaki

Deep learning, especially convolutional neural networks (CNNs) and Transformer architectures, have become the focus of extensive research in medical image segmentation, achieving impressive results. However, CNNs come with inductive biases…

图像与视频处理 · 电气工程与系统科学 2024-09-20 Xiao Liu , Peng Gao , Tao Yu , Fei Wang , Ru-Yue Yuan

In Transformer architectures, tokens\textemdash discrete units derived from raw data\textemdash are formed by segmenting inputs into fixed-length chunks. Each token is then mapped to an embedding, enabling parallel attention computations…

机器学习 · 计算机科学 2026-01-14 Zhenglun Kong , Yize Li , Fanhu Zeng , Lei Xin , Shvat Messica , Xue Lin , Pu Zhao , Manolis Kellis , Hao Tang , Marinka Zitnik

Encoder transformer models compress information from all tokens in a sequence into a single [CLS] token to represent global context. This approach risks diluting fine-grained or hierarchical features, leading to information loss in…

计算与语言 · 计算机科学 2025-09-23 Asif Shahriar , Rifat Shahriyar , M Saifur Rahman
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