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Multiple instance learning is an ideal mode of analysis for histopathology data, where vast whole slide images are typically annotated with a single global label. In such cases, a whole slide image is modelled as a collection of tissue…

计算机视觉与模式识别 · 计算机科学 2023-06-29 Leo Fillioux , Joseph Boyd , Maria Vakalopoulou , Paul-Henry Cournède , Stergios Christodoulidis

Foundation large language models (LLMs) have shown an impressive ability to solve tasks across a wide range of fields including health. To effectively solve personalized health tasks, LLMs need the ability to ingest a diversity of data…

In longitudinal electronic health records (EHRs), the event records of a patient are distributed over a long period of time and the temporal relations between the events reflect sufficient domain knowledge to benefit prediction tasks such…

计算与语言 · 计算机科学 2020-06-16 Xueping Peng , Guodong Long , Tao Shen , Sen Wang , Jing Jiang , Michael Blumenstein

With hundreds of multilingual embedding models available, practitioners lack clear guidance on which provide genuine cross-lingual semantic alignment versus task performance through language-specific patterns. Task-driven benchmarks (MTEB)…

计算与语言 · 计算机科学 2026-01-16 Wen G. Gong

This study proposes a Transformer-based longitudinal modeling method to address challenges in clinical risk classification with heterogeneous Electronic Health Record (EHR) data, including irregular temporal patterns, large modality…

机器学习 · 计算机科学 2025-11-07 Anzhuo Xie , Wei-Chen Chang

In the context of structural health monitoring (SHM), the selection and extraction of damage-sensitive features from raw sensor recordings represent a critical step towards solving the inverse problem underlying the identification of…

计算工程、金融与科学 · 计算机科学 2025-12-03 Matteo Torzoni , Andrea Manzoni , Stefano Mariani

Navigating to out-of-sight targets from human instructions in unfamiliar environments is a core capability for service robots. Despite substantial progress, most approaches underutilize reusable, persistent memory, constraining performance…

机器人学 · 计算机科学 2026-03-03 Haochen Niu , Lantao Zhang , Xingwu Ji , Rendong Ying , Peilin Liu , Fei Wen

Poor sitting posture is a critical yet often overlooked factor contributing to long-term musculoskeletal disorders and physiological dysfunctions. Existing sitting posture monitoring systems, although leveraging visual, IMU, or…

计算与语言 · 计算机科学 2025-09-17 Jian Gao , Fufangchen Zhao , Yiyang Zhang , Danfeng Yan

This study proposes a risk prediction method based on a Multi-Scale Temporal Alignment Network (MSTAN) to address the challenges of temporal irregularity, sampling interval differences, and multi-scale dynamic dependencies in Electronic…

机器学习 · 计算机科学 2025-11-27 Wei-Chen Chang , Lu Dai , Ting Xu

Despite the promising performance of state space models (SSMs) in long sequence modeling, limitations still exist. Advanced SSMs like S5 and S6 (Mamba) in addressing non-uniform sampling, their recursive structures impede efficient SSM…

机器学习 · 计算机科学 2024-06-11 Biqing Qi , Junqi Gao , Kaiyan Zhang , Dong Li , Jianxing Liu , Ligang Wu , Bowen Zhou

EHR systems lack a unified code system forrepresenting medical concepts, which acts asa barrier for the deployment of deep learningmodels in large scale to multiple clinics and hos-pitals. To overcome this problem, we…

计算与语言 · 计算机科学 2022-01-19 Kyunghoon Hur , Jiyoung Lee , Jungwoo Oh , Wesley Price , Young-Hak Kim , Edward Choi

Emergency Department (ED) crowding is a worldwide issue that affects the efficiency of hospital management and the quality of patient care. This occurs when the request for an admit ward-bed to receive a patient is delayed until an…

统计方法学 · 统计学 2019-07-05 Jack Yutong Li , Ruoqing Zhu , Annie Qu , Han Ye , Zhankun Sun

Multi-task learning for molecular property prediction is becoming increasingly important in drug discovery. However, in contrast to other domains, the performance of multi-task learning in drug discovery is still not satisfying as the…

生物大分子 · 定量生物学 2022-10-07 Shengchao Liu , Meng Qu , Zuobai Zhang , Huiyu Cai , Jian Tang

Text embeddings from Large Language Models (LLMs) have become foundational for numerous applications. However, these models typically operate on raw text, overlooking the rich structural information, such as hyperlinks or citations, that…

机器学习 · 计算机科学 2025-10-13 Shikun Liu , Haoyu Wang , Mufei Li , Pan Li

Large Language Models (LLMs) have fundamentally transformed approaches to Natural Language Processing (NLP) tasks across diverse domains. In healthcare, accurate and cost-efficient text classification is crucial, whether for clinical notes…

计算与语言 · 计算机科学 2026-02-16 Hajar Sakai , Sarah S. Lam

Electronic medical reports (EHR) contain a vast amount of information that can be leveraged for machine learning applications in healthcare. However, existing survival analysis methods often struggle to effectively handle the complexity of…

计算与语言 · 计算机科学 2025-08-01 Paul Minchella , Loïc Verlingue , Stéphane Chrétien , Rémi Vaucher , Guillaume Metzler

Deploying clinical ML is slow and brittle: models that work at one hospital often degrade under distribution shifts at the next. In this work, we study a simple question -- can large language models (LLMs) create portable patient embeddings…

机器学习 · 计算机科学 2026-04-21 Zongliang Ji , Yifei Sun , Andre Amaral , Anna Goldenberg , Rahul G. Krishnan

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

计算与语言 · 计算机科学 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao

The way we analyse clinical texts has undergone major changes over the last years. The introduction of language models such as BERT led to adaptations for the (bio)medical domain like PubMedBERT and ClinicalBERT. These models rely on large…

计算与语言 · 计算机科学 2023-09-15 Tom van Sonsbeek , Xiantong Zhen , Marcel Worring

Rapid growth of the biomedical literature has led to many advances in the biomedical text mining field. Among the vast amount of information, biomedical article abstracts are the easily accessible sources. However, the number of the…

计算与语言 · 计算机科学 2022-01-19 Mehmet Efruz Karabulut , K. Vijay-Shanker
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