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Since clinical letters contain sensitive information, clinical-related datasets can not be widely applied in model training, medical research, and teaching. This work aims to generate reliable, various, and de-identified synthetic clinical…

计算与语言 · 计算机科学 2024-09-17 Libo Ren , Samuel Belkadi , Lifeng Han , Warren Del-Pinto , Goran Nenadic

Misinformation in healthcare, from vaccine hesitancy to unproven treatments, poses risks to public health and trust in medical systems. While machine learning and natural language processing have advanced automated fact-checking, validating…

计算与语言 · 计算机科学 2025-09-18 Mariano Barone , Antonio Romano , Giuseppe Riccio , Marco Postiglione , Vincenzo Moscato

Multi-annotator learning (MAL) aims to model annotator-specific labeling patterns. However, existing methods face a critical challenge: they simply skip updating annotator-specific model parameters when encountering missing labels, i.e., a…

多媒体 · 计算机科学 2025-08-08 Liyun Zhang , Zheng Lian , Hong Liu , Takanori Takebe , Yuta Nakashima

Objective: To improve performance of medical entity normalization across many languages, especially when fewer language resources are available compared to English. Materials and Methods: We introduce xMEN, a modular system for…

计算与语言 · 计算机科学 2024-12-30 Florian Borchert , Ignacio Llorca , Roland Roller , Bert Arnrich , Matthieu-P. Schapranow

Biomedical question-answering (QA) has gained increased attention for its capability to provide users with high-quality information from a vast scientific literature. Although an increasing number of biomedical QA datasets has been recently…

计算与语言 · 计算机科学 2021-02-17 Gabriele Pergola , Elena Kochkina , Lin Gui , Maria Liakata , Yulan He

We present a novel confidence refinement scheme that enhances pseudo labels in semi-supervised semantic segmentation. Unlike existing methods, which filter pixels with low-confidence predictions in isolation, our approach leverages the…

计算机视觉与模式识别 · 计算机科学 2024-07-04 Moshe Kimhi , Shai Kimhi , Evgenii Zheltonozhskii , Or Litany , Chaim Baskin

Semi-supervised medical image segmentation has gained growing interest due to its ability to utilize unannotated data. The current state-of-the-art methods mostly rely on pseudo-labeling within a co-training framework. These methods depend…

图像与视频处理 · 电气工程与系统科学 2024-05-14 Suruchi Kumari , Pravendra Singh

Multi-modal Entity Linking (MEL) is a fundamental component for various downstream tasks. However, existing MEL datasets suffer from small scale, scarcity of topic types and limited coverage of tasks, making them incapable of effectively…

信息检索 · 计算机科学 2024-10-25 Fang Wang , Shenglin Yin , Xiaoying Bai , Minghao Hu , Tianwei Yan , Yi Liang

Semi-supervised learning has attracted much attention due to its less dependence on acquiring abundant annotations from experts compared to fully supervised methods, which is especially important for medical image segmentation which…

计算机视觉与模式识别 · 计算机科学 2024-10-24 Yichi Zhang , Jin Yang , Yuchen Liu , Yuan Cheng , Yuan Qi

High-quality instruction-tuning data is crucial for developing Large Language Models (LLMs) that can effectively navigate real-world tasks and follow human instructions. While synthetic data generation offers a scalable approach for…

计算与语言 · 计算机科学 2025-10-14 Shuhaib Mehri , Xiusi Chen , Heng Ji , Dilek Hakkani-Tür

Timely detection of critical health conditions remains a major challenge in public health analytics, especially in Big Data environments characterized by high volume, rapid velocity, and diverse variety of clinical data. This study presents…

数据库 · 计算机科学 2025-10-14 Ritesh Chandra , Sonali Agarwal , Navjot Singh

Automating the decision of whether a code change requires manual review is vital for maintaining software quality in modern development workflows. However, the emergence of new programming languages and frameworks creates a critical…

软件工程 · 计算机科学 2025-09-08 Yogev Cohen , Dudi Ohayon , Romy Somkin , Yehudit Aperstein , Alexander Apartsin

Medical research, particularly in predicting patient outcomes, heavily relies on medical time series data extracted from Electronic Health Records (EHR), which provide extensive information on patient histories. Despite rigorous…

机器学习 · 计算机科学 2025-06-04 Yuhao Li , Ling Luo , Uwe Aickelin

Semi-supervised learning (SSL) has emerged as a promising paradigm in medical image segmentation, offering competitive performance while substantially reducing the need for extensive manual annotation. When combined with active learning…

计算机视觉与模式识别 · 计算机科学 2025-09-25 Yi Yang

Improving Sparse Autoencoders (SAEs) requires benchmarks that can precisely validate architectural innovations. However, current SAE benchmarks on LLMs are often too noisy to differentiate architectural improvements, and current synthetic…

机器学习 · 计算机科学 2026-02-17 David Chanin , Adrià Garriga-Alonso

Drug synergy is profoundly influenced by cellular context, as variations in protein interaction landscapes and pathway activities across cell types reshape how drugs act in combination. Most existing models overlook this heterogeneity,…

定量方法 · 定量生物学 2026-03-24 Keqin Peng , Guangxin Su , Qinshan Shi , Shuai Gao , Ren Wang , Can Chen , Jun Wen

Medical image segmentation annotations exhibit variations among experts due to the ambiguous boundaries of segmented objects and backgrounds in medical images. Although using multiple annotations for each image in the fully-supervised has…

计算机视觉与模式识别 · 计算机科学 2023-11-20 Shuai Wang , Tengjin Weng , Jingyi Wang , Yang Shen , Zhidong Zhao , Yixiu Liu , Pengfei Jiao , Zhiming Cheng , Yaqi Wang

The original ImageNet benchmark enforces a single-label assumption, despite many images depicting multiple objects. This leads to label noise and limits the richness of the learning signal. Multi-label annotations more accurately reflect…

计算机视觉与模式识别 · 计算机科学 2026-03-09 Junyu Chen , Md Yousuf Harun , Christopher Kanan

Despite the advances in Referring Expression Segmentation (RES) benchmarks, their evaluation protocols remain constrained, primarily focusing on either single targets with short queries (containing minimal attributes) or multiple targets…

机器学习 · 计算机科学 2025-05-26 Dong-Hee Kim , Hyunjee Song , Donghyun Kim

Entity linking (EL) for biomedical text is typically benchmarked on English-only corpora with flat mentions, leaving the more realistic scenario of nested and multilingual mentions largely unexplored. We present our system for the BioNNE…

计算与语言 · 计算机科学 2025-09-15 Chunyu Li , Xindi Zheng , Siqi Liu