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Despite the explosion of interest in healthcare AI research, the reproducibility and benchmarking of those research works are often limited due to the lack of standard benchmark datasets and diverse evaluation metrics. To address this…

机器学习 · 计算机科学 2021-01-13 Yue Zhao , Zhi Qiao , Cao Xiao , Lucas Glass , Jimeng Sun

We present FairHealth, an open-source Python library that provides a unified, modular framework for trustworthy machine learning in healthcare applications, with particular focus on low-resource and low-income country (LMIC) settings such…

机器学习 · 计算机科学 2026-05-12 Farjana Yesmin

Deep learning has shown great promise in physiological signal analysis, yet its progress is hindered by heterogeneous data formats, inconsistent preprocessing strategies, fragmented model pipelines, and non-reproducible experimental setups.…

人工智能 · 计算机科学 2025-12-30 Tao Zhou , Lingyu Shu , Zixing Zhang , Jing Han

The integration of artificial intelligence (AI) into pathology is advancing precision medicine by improving diagnosis, treatment planning, and patient outcomes. Digitised whole-slide images (WSIs) capture rich spatial and morphological…

Radiomics enables the extraction of quantitative biomarkers from medical images for precision modeling, but reproducibility and scalability remain limited due to heterogeneous software implementations and incomplete adherence to standards.…

Scientific research frequently involves the use of computational tools and methods. Providing thorough documentation, open-source code, and data -- the creation of reproducible computational research -- helps others understand a…

数字图书馆 · 计算机科学 2022-09-14 Tim von Hahn , Chris K. Mechefske

Background and Objective: Deep learning enables tremendous progress in medical image analysis. One driving force of this progress are open-source frameworks like TensorFlow and PyTorch. However, these frameworks rarely address issues…

图像与视频处理 · 电气工程与系统科学 2021-04-29 Alain Jungo , Olivier Scheidegger , Mauricio Reyes , Fabian Balsiger

The increasing importance of Computational Science and Engineering has highlighted the need for high-quality scientific software. However, research software development is often hindered by limited funding, time, staffing, and technical…

软件工程 · 计算机科学 2025-03-10 Armin Ariamajd , Raquel López-Ríos de Castro , Andrea Volkamer

Automated deidentification of clinical text data is crucial due to the high cost of manual deidentification, which has been a barrier to sharing clinical text and the advancement of clinical natural language processing. However, creating…

计算与语言 · 计算机科学 2023-11-07 Callandra Moore , Jonathan Ranisau , Walter Nelson , Jeremy Petch , Alistair Johnson

Leveraging medical record information in the era of big data and machine learning comes with the caveat that data must be cleaned and de-identified. Facilitating data sharing and harmonization for multi-center collaborations are…

图像与视频处理 · 电气工程与系统科学 2023-05-11 Adrienne Kline , Vinesh Appadurai , Yuan Luo , Sanjiv Shah

Artificial intelligence has provided us with an exploration of a whole new research era. As more data and better computational power become available, the approach is being implemented in various fields. The demand for it in health…

机器学习 · 计算机科学 2020-08-11 Gloria Hyunjung Kwak , Pan Hui

Clinical trials are conducted to test the effectiveness and safety of potential drugs in humans for regulatory approval. Machine learning (ML) has recently emerged as a new tool to assist in clinical trials. Despite this progress, there…

人工智能 · 计算机科学 2023-10-06 Zifeng Wang , Brandon Theodorou , Tianfan Fu , Cao Xiao , Jimeng Sun

Artificial intelligence (AI) has the potential to transform medical imaging by automating image analysis and accelerating clinical research. However, research and clinical use are limited by the wide variety of AI implementations and…

Clinical decisions are high-stakes and require explicit justification, making model interpretability essential for auditing deep clinical models prior to deployment. As the ecosystem of model architectures and explainability methods…

机器学习 · 计算机科学 2026-03-27 Yongda Fan , John Wu , Andrea Fitzpatrick , Naveen Baskaran , Jimeng Sun , Adam Cross

Personalized medicine remains a major challenge for scientists. The rapid growth of Machine learning and Deep learning has made them a feasible al- ternative for predicting the most appropriate therapy for individual patients. However, the…

机器学习 · 计算机科学 2025-06-10 Antonio Jesús Banegas-Luna , Horacio Pérez-Sánchez

Our analysis of recent AI4H publications reveals that, despite a trend toward utilizing open datasets and sharing modeling code, 74% of AI4H papers still rely on private datasets or do not share their code. This is especially concerning in…

计算机与社会 · 计算机科学 2026-03-05 John Wu , Zhenbang Wu , Jimeng Sun

The proliferation of physiological sensors opens new opportunities to explore interactions, conduct experiments and evaluate the user experience with continuous monitoring of bodily functions. Commercial devices, however, can be costly or…

人机交互 · 计算机科学 2023-09-13 Jitesh Joshi , Katherine Wang , Youngjun Cho

Phenotyping consists in applying algorithms to identify individuals associated with a specific, potentially complex, trait or condition, typically out of a collection of Electronic Health Records (EHRs). Because a lot of the clinical…

Robust machine learning relies on access to data that can be used with standardized frameworks in important tasks and the ability to develop models whose performance can be reasonably reproduced. In machine learning for healthcare, the…

Reproducibility of computational research is critical for ensuring transparency, reliability and reusability. Challenges with computational reproducibility have been documented in several fields, but healthcare discrete-event simulation…

其他定量生物学 · 定量生物学 2025-09-17 Amy Heather , Thomas Monks , Alison Harper , Navonil Mustafee , Andrew Mayne
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