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Weakly Supervised Semantic Segmentation (WSSS) with image-level labels typically leverages Class Activation Maps (CAMs) to achieve pixel-level predictions. Recently, Contrastive Language-Image Pre-training (CLIP) has been introduced to…

计算机视觉与模式识别 · 计算机科学 2026-05-07 Zhiwei Yang , Pengfei Song , Yucong Meng , Kexue Fu , Shuo Wang , Zhijian Song

Deep learning-based drug-target interaction (DTI) prediction methods have demonstrated strong performance; however, real-world applicability remains constrained by limited data diversity and modeling complexity. To address these challenges,…

Preventable adverse events as a result of medical errors present a growing concern in the healthcare system. As drug-drug interactions (DDIs) may lead to preventable adverse events, being able to extract DDIs from drug labels into a…

计算与语言 · 计算机科学 2019-11-06 Tung Tran , Ramakanth Kavuluru , Halil Kilicoglu

The paradigm shift toward structure-driven molecule generation has been propelled by advances in deep generative models, such as variational auto-encoders and diffusion models. However, these generative models for molecular design remain…

机器学习 · 计算机科学 2026-04-17 Peidong Liu , Wenbo Zhang , Wei Ju , Jiancheng Lv , Xianggen Liu

Adverse drug-drug interactions (DDIs) remain a leading cause of morbidity and mortality. Identifying potential DDIs during the drug design process is critical for patients and society. Although several computational models have been…

机器学习 · 计算机科学 2019-11-21 Kexin Huang , Cao Xiao , Trong Nghia Hoang , Lucas M. Glass , Jimeng Sun

Self-supervised pretraining (SSP) has been recognized as a method to enhance prediction accuracy in various downstream tasks. However, its efficacy for DNA sequences remains somewhat constrained. This limitation stems primarily from the…

机器学习 · 计算机科学 2024-05-15 Tong Yu , Lei Cheng , Ruslan Khalitov , Erland Brandser Olsson , Zhirong Yang

We present FastBoost, a parameter-efficient neural architecture that achieves state-of-the-art performance on CIFAR benchmarks through a novel Dynamically Scaled Progressive Attention (DSPA) mechanism. Our design establishes new efficiency…

计算机视觉与模式识别 · 计算机科学 2025-11-04 JunXi Yuan

Unsupervised anomaly detection using deep learning has garnered significant research attention due to its broad applicability, particularly in medical imaging where labeled anomalous data are scarce. While earlier approaches leverage…

计算机视觉与模式识别 · 计算机科学 2025-03-19 Chunlei Li , Yilei Shi , Jingliang Hu , Xiao Xiang Zhu , Lichao Mou

Visual attention mechanisms have proven to be integrally important constituent components of many modern deep neural architectures. They provide an efficient and effective way to utilize visual information selectively, which has shown to be…

计算机视觉与模式识别 · 计算机科学 2019-05-24 Siddhesh Khandelwal , Leonid Sigal

While modern text-to-image models excel at prompt-based generation, they often lack the fine-grained control necessary for specific user requirements like spatial layouts or subject appearances. Multi-condition control addresses this, yet…

计算机视觉与模式识别 · 计算机科学 2026-02-09 Chao Zhou , Tianyi Wei , Yiling Chen , Wenbo Zhou , Nenghai Yu

Motivation: Drug discovery demands rapid quantification of compound-protein interaction (CPI). However, there is a lack of methods that can predict compound-protein affinity from sequences alone with high applicability, accuracy, and…

生物大分子 · 定量生物学 2020-12-17 Mostafa Karimi , Di Wu , Zhangyang Wang , Yang Shen

The rapid advancement of sensor technologies and artificial intelligence are creating new opportunities for traffic safety enhancement. Dashboard cameras (dashcams) have been widely deployed on both human driving vehicles and automated…

计算机视觉与模式识别 · 计算机科学 2021-12-22 Muhammad Monjurul Karim , Yu Li , Ruwen Qin , Zhaozheng Yin

We investigate molecular mechanisms of resistant or sensitive response of cancer drug combination therapies in an inductive and interpretable manner. Though deep learning algorithms are widely used in the drug synergy prediction problem, it…

机器学习 · 计算机科学 2021-05-18 Zehao Dong , Heming Zhang , Yixin Chen , Fuhai Li

Single-cell transcriptomics enabled the study of cellular heterogeneity in response to perturbations at the resolution of individual cells. However, scaling high-throughput screens (HTSs) to measure cellular responses for many drugs remains…

机器学习 · 计算机科学 2023-01-03 Leon Hetzel , Simon Böhm , Niki Kilbertus , Stephan Günnemann , Mohammad Lotfollahi , Fabian Theis

Accurately predicting the binding affinity between drugs and proteins is an essential step for computational drug discovery. Since graph neural networks (GNNs) have demonstrated remarkable success in various graph-related tasks, GNNs have…

定量方法 · 定量生物学 2020-12-18 Jingbo Zhou , Shuangli Li , Liang Huang , Haoyi Xiong , Fan Wang , Tong Xu , Hui Xiong , Dejing Dou

As a necessary process in drug development, finding a drug compound that can selectively bind to a specific protein is highly challenging and costly. Drug-target affinity (DTA), which represents the strength of drug-target interaction…

生物大分子 · 定量生物学 2023-12-18 Zhiqin Zhu , Zheng Yao , Guanqiu Qi , Neal Mazur , Baisen Cong

Drug--target affinity prediction is pivotal for accelerating drug discovery, yet existing methods suffer from significant performance degradation in realistic cold-start scenarios (unseen drugs/targets/pairs), primarily driven by…

机器学习 · 计算机科学 2026-03-17 Zihan Dun , Liuyi Xu , An-Yang Lu , Shuang Li , Yining Qian

Domain shift happens in cross-domain scenarios commonly because of the wide gaps between different domains: when applying a deep learning model well-trained in one domain to another target domain, the model usually performs poorly. To…

计算机视觉与模式识别 · 计算机科学 2021-08-19 Munan Ning , Cheng Bian , Dong Wei , Chenglang Yuan , Yaohua Wang , Yang Guo , Kai Ma , Yefeng Zheng

Assuming that neither source data nor source model parameters are accessible, black-box domain adaptation (BBDA) represents a highly practical yet challenging setting, where transferable knowledge is limited to the predictions of a…

计算机视觉与模式识别 · 计算机科学 2026-05-04 Zhe Zhang , Jing Li , Wanli Xue , Xu Cheng , Jianhua Zhang , Qinghua Hu , Shengyong Chen

Structure-based drug design (SBDD) aims to design small-molecule ligands that bind with high affinity and specificity to pre-determined protein targets. Generative SBDD methods leverage structural data of drugs in complex with their protein…