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Accurate and efficient brain tumor segmentation remains a critical challenge in neuroimaging due to the heterogeneous nature of tumor subregions and the high computational cost of volumetric inference. In this paper, we propose…

计算机视觉与模式识别 · 计算机科学 2025-08-05 Fatemeh Ziaeetabar

We propose a Transformer architecture for volumetric segmentation, a challenging task that requires keeping a complex balance in encoding local and global spatial cues, and preserving information along all axes of the volume. Encoder of the…

图像与视频处理 · 电气工程与系统科学 2022-07-04 Himashi Peiris , Munawar Hayat , Zhaolin Chen , Gary Egan , Mehrtash Harandi

Glioma is the most common and aggressive brain tumor. Magnetic resonance imaging (MRI) plays a vital role to evaluate tumors for the arrangement of tumor surgery and the treatment of subsequent procedures. However, the manual segmentation…

图像与视频处理 · 电气工程与系统科学 2022-03-23 Wenbo Zhang , Guang Yang , He Huang , Weiji Yang , Xiaomei Xu , Yongkai Liu , Xiaobo Lai

We trained and applied an encoder-decoder model to semantically segment breast biopsy images into biologically meaningful tissue labels. Since conventional encoder-decoder networks cannot be applied directly on large biopsy images and the…

计算机视觉与模式识别 · 计算机科学 2017-10-12 Sachin Mehta , Ezgi Mercan , Jamen Bartlett , Donald Weaver , Joann Elmore , Linda Shapiro

Deep neural networks have been widely used in medical image analysis and medical image segmentation is one of the most important tasks. U-shaped neural networks with encoder-decoder are prevailing and have succeeded greatly in various…

图像与视频处理 · 电气工程与系统科学 2023-06-09 Juntao Jiang , Xiyu Chen , Guanzhong Tian , Yong Liu

Transformer, which can benefit from global (long-range) information modeling using self-attention mechanisms, has been successful in natural language processing and 2D image classification recently. However, both local and global features…

计算机视觉与模式识别 · 计算机科学 2021-06-29 Wenxuan Wang , Chen Chen , Meng Ding , Jiangyun Li , Hong Yu , Sen Zha

Automatic 3D neuron reconstruction is critical for analysing the morphology and functionality of neurons in brain circuit activities. However, the performance of existing tracing algorithms is hinged by the low image quality. Recently, a…

图像与视频处理 · 电气工程与系统科学 2021-09-17 Heng Wang , Chaoyi Zhang , Jianhui Yu , Yang Song , Siqi Liu , Wojciech Chrzanowski , Weidong Cai

The adoption of Vision Transformers (ViTs) based architectures represents a significant advancement in 3D Medical Image (MI) segmentation, surpassing traditional Convolutional Neural Network (CNN) models by enhancing global contextual…

计算机视觉与模式识别 · 计算机科学 2024-04-25 Shehan Perera , Pouyan Navard , Alper Yilmaz

Fully Convolutional Neural Networks (FCNNs) with contracting and expanding paths have shown prominence for the majority of medical image segmentation applications since the past decade. In FCNNs, the encoder plays an integral role by…

图像与视频处理 · 电气工程与系统科学 2021-10-12 Ali Hatamizadeh , Yucheng Tang , Vishwesh Nath , Dong Yang , Andriy Myronenko , Bennett Landman , Holger Roth , Daguang Xu

Automatic segmentation of brain glioma from multimodal MRI scans plays a key role in clinical trials and practice. Unfortunately, manual segmentation is very challenging, time-consuming, costly, and often inaccurate despite human expertise…

图像与视频处理 · 电气工程与系统科学 2020-12-08 Minh H. Vu , Tufve Nyholm , Tommy Löfstedt

Vision Transformers (ViT)s have recently become popular due to their outstanding modeling capabilities, in particular for capturing long-range information, and scalability to dataset and model sizes which has led to state-of-the-art…

图像与视频处理 · 电气工程与系统科学 2022-04-06 Ali Hatamizadeh , Ziyue Xu , Dong Yang , Wenqi Li , Holger Roth , Daguang Xu

Convolutional neural networks (CNNs) achieved the state-of-the-art performance in medical image segmentation due to their ability to extract highly complex feature representations. However, it is argued in recent studies that traditional…

计算机视觉与模式识别 · 计算机科学 2025-03-31 Zhendi Gong , Andrew P. French , Guoping Qiu , Xin Chen

We propose a new deep learning method for tumour segmentation when dealing with missing imaging modalities. Instead of producing one network for each possible subset of observed modalities or using arithmetic operations to combine feature…

图像与视频处理 · 电气工程与系统科学 2019-10-22 Reuben Dorent , Samuel Joutard , Marc Modat , Sébastien Ourselin , Tom Vercauteren

In unsupervised medical image registration, the predominant approaches involve the utilization of a encoder-decoder network architecture, allowing for precise prediction of dense, full-resolution displacement fields from given paired…

计算机视觉与模式识别 · 计算机科学 2024-02-07 Xi Jia , Wenqi Lu , Xinxing Cheng , Jinming Duan

Segmenting biomarkers in medical images is crucial for various biotech applications. Despite advances, Transformer and CNN based methods often struggle with variations in staining and morphology, limiting feature extraction. In medical…

图像与视频处理 · 电气工程与系统科学 2025-06-25 Saad Wazir , Daeyoung Kim

Deep learning applied to the reconstruction of 3D shapes has seen growing interest. A popular approach to 3D reconstruction and generation in recent years has been the CNN encoder-decoder model usually applied in voxel space. However, this…

计算机视觉与模式识别 · 计算机科学 2020-05-12 Mateusz Michalkiewicz , Eugene Belilovsky , Mahsa Baktashmotlagh , Anders Eriksson

U-Net is widely used in medical image segmentation due to its simple and flexible architecture design. To address the challenges of scale and complexity in medical tasks, several variants of U-Net have been proposed. In particular, methods…

图像与视频处理 · 电气工程与系统科学 2024-10-08 Weibin Yang , Zhiqi Dong , Mingyuan Xu , Longwei Xu , Dehua Geng , Yusong Li , Pengwei Wang

Accurate detection and segmentation of brain tumors from magnetic resonance imaging (MRI) are essential for diagnosis, treatment planning, and clinical monitoring. While convolutional architectures such as U-Net have long been the backbone…

计算机视觉与模式识别 · 计算机科学 2025-10-03 Arman Behnam

Identifying polyps is challenging for automatic analysis of endoscopic images in computer-aided clinical support systems. Models based on convolutional networks (CNN), transformers, and their combinations have been proposed to segment…

计算机视觉与模式识别 · 计算机科学 2022-06-08 Nguyen Thanh Duc , Nguyen Thi Oanh , Nguyen Thi Thuy , Tran Minh Triet , Dinh Viet Sang

This paper presents a novel framework for processing volumetric medical information using Visual Transformers (ViTs). First, We extend the state-of-the-art Swin Transformer model to the 3D medical domain. Second, we propose a new approach…

图像与视频处理 · 电气工程与系统科学 2024-06-06 Cristhian Forigua , Maria Escobar , Pablo Arbelaez
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