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We present the Julia package Manifolds$.$jl, providing a fast and easy-to-use library of Riemannian manifolds and Lie groups. This package enables working with data defined on a Riemannian manifold, such as the circle, the sphere, symmetric…

数学软件 · 计算机科学 2025-05-20 Seth D. Axen , Mateusz Baran , Ronny Bergmann , Krzysztof Rzecki

LongMemory.jl is a package for time series long memory modelling in Julia. The package provides functions to generate long memory, estimate model parameters, and forecast. Generating methods include fractional differencing, stochastic error…

数学软件 · 计算机科学 2024-01-26 J. Eduardo Vera-Valdés

Random variables and their distributions are a central part in many areas of statistical methods. The Distributions.jl package provides Julia users and developers tools for working with probability distributions, leveraging Julia features…

Copulas are functions that describe dependence structures of random vectors, without describing their univariate marginals. In statistics, the separation is sometimes useful, the quality and/or quantity of available information on these two…

统计计算 · 统计学 2024-11-14 Oskar Laverny , Santiago Jimenez

In this paper we present BilevelJuMP, a new Julia package to support bilevel optimization within the JuMP framework. The package is a Julia library that enables the user to describe both upper and lower-level optimization problems using the…

最优化与控制 · 数学 2022-12-21 Joaquim Dias Garcia , Guilherme Bodin , Alexandre Street

We present FractionalDiffEq.jl, a comprehensive solver suite for solving fractional differential equations, featuring high-performance numerical algorithms in the Julia programming language. FractionalDiffEq.jl is designed to be…

数值分析 · 数学 2025-06-10 Qingyu Qu , Wei Ruan

We present StochasticPrograms.jl, a user-friendly and powerful open-source framework for stochastic programming written in the Julia language. The framework includes both modeling tools and structure-exploiting optimization algorithms.…

最优化与控制 · 数学 2022-09-07 Martin Biel , Mikael Johansson

Forward marginal effects have recently been introduced as a versatile and effective model-agnostic interpretation method particularly suited for non-linear and non-parametric prediction models. They provide comprehensible model explanations…

机器学习 · 计算机科学 2024-09-13 Holger Löwe , Christian A. Scholbeck , Christian Heumann , Bernd Bischl , Giuseppe Casalicchio

In this paper, we present IntervalMDP.jl, a Julia package for probabilistic analysis of interval Markov Decision Processes (IMDPs). IntervalMDP.jl facilitates the synthesis of optimal strategies and verification of IMDPs against…

系统与控制 · 电气工程与系统科学 2024-04-30 Frederik Baymler Mathiesen , Morteza Lahijanian , Luca Laurenti

Sequential sampling models (SSMs) are a widely used framework describing decision-making as a stochastic, dynamic process of evidence accumulation. SSMs popularity across cognitive science has driven the development of various software…

数学软件 · 计算机科学 2025-12-17 Kianté Fernandez , Dominique Makowski , Christopher Fisher

Mathematical models of natural and man-made systems often have many adjustable parameters that must be estimated from multiple, potentially conflicting datasets. Rather than reporting a single best-fit parameter vector, it is often more…

定量方法 · 定量生物学 2026-04-01 Jeffrey D. Varner

Beta coefficients for linear regression models represent the ideal form of an interpretable feature effect. However, for non-linear models and especially generalized linear models, the estimated coefficients cannot be interpreted as a…

We introduce Metatheory.jl: a lightweight and performant general purpose symbolics and metaprogramming framework meant to simplify the act of writing complex Julia metaprograms and to significantly enhance Julia with a native term rewriting…

编程语言 · 计算机科学 2021-04-14 Alessandro Cheli

For scientific machine learning tasks with a lot of custom code, picking the right Automatic Differentiation (AD) system matters. Our Julia package DifferentiationInterface$.$jl provides a common frontend to a dozen AD backends, unlocking…

数学软件 · 计算机科学 2025-05-19 Guillaume Dalle , Adrian Hill

Inference in hierarchical nonlinear models needs careful consideration about targeting parameters that have either a conditional or population-average interpretation. For the special case of mixed-effects nonlinear sigmoidal models we…

应用统计 · 统计学 2017-07-11 Daniel Gerhard , Christian Ritz

Agent-based models capture heterogeneity among individuals in a population and are widely used in studies of multi-cellular systems, disease, epidemics and demography to name a few. However, existing frameworks consider discrete time-step…

种群与进化 · 定量生物学 2024-10-03 Paul Piho , Philipp Thomas

Differentiating through constrained optimization problems is increasingly central to learning, control, and large-scale decision-making systems, yet practical integration remains challenging due to solver specialization and interface…

Bates et al. (2015) described the evaluation of the profiled log-likelihood of a linear mixed-effects model by updating a sparse, symmetric positive-definite matrix and computing its Cholesky factor, as implemented in the lme4 package for…

统计计算 · 统计学 2025-05-20 Douglas Bates , Phillip M. Alday , Ajinkya H. Kokandakar

MultiPrecisionArrays.jl is a Julia package. This package provides data structures and solvers for several variants of iterative refinement. It will become much more useful when half precision (aka Float16) is fully supported in LAPACK/BLAS.…

数值分析 · 数学 2025-08-11 C. T. Kelley

Symbolic integration over the Haar measure of compact groups is a computational cornerstone in quantum information science and random matrix theory. We present \texttt{IntegrateUnitary.jl}, a comprehensive Julia package for computing exact…

量子物理 · 物理学 2026-05-25 Łukasz Pawela , Zbigniew Puchała
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