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Developing models with robust group fairness properties is paramount, particularly in ethically sensitive domains such as medical diagnosis. Recent approaches to achieving fairness in machine learning require a substantial amount of…

机器学习 · 计算机科学 2024-10-02 Yuyang Xue , Junyu Yan , Raman Dutt , Fasih Haider , Jingshuai Liu , Steven McDonagh , Sotirios A. Tsaftaris

Predicting cancer treatment outcomes requires models that are both accurate and interpretable, particularly in the presence of heterogeneous clinical data. While large language models (LLMs) have shown strong performance in biomedical NLP,…

计算与语言 · 计算机科学 2025-10-21 Raghu Vamshi Hemadri , Geetha Krishna Guruju , Kristi Topollai , Anna Ewa Choromanska

Large language models (LLMs) have achieved remarkable performance on various natural language tasks. However, they are trained on static corpora and their knowledge can become outdated quickly in the fast-changing world. This motivates the…

计算与语言 · 计算机科学 2025-03-04 Tianci Liu , Ruirui Li , Yunzhe Qi , Hui Liu , Xianfeng Tang , Tianqi Zheng , Qingyu Yin , Monica Xiao Cheng , Jun Huan , Haoyu Wang , Jing Gao

By pretraining on trillions of tokens, an LLM gains the capability of text generation. However, to enhance its utility and reduce potential harm, SFT and alignment are applied sequentially to the pretrained model. Because SFT and alignment…

计算与语言 · 计算机科学 2026-05-11 Zhichao Wang , Bin Bi , Zixu Zhu , Xiangbo Mao , Jun Wang , Shiyu Wang , Cheng Wang , Dong Nie , Lingzi Hong

The exponential growth of biomedical texts such as biomedical literature and electronic health records (EHRs), poses a significant challenge for clinicians and researchers to access clinical information efficiently. To tackle this…

计算与语言 · 计算机科学 2023-07-17 Qianqian Xie , Zheheng Luo , Benyou Wang , Sophia Ananiadou

Explorations in fine-tuning Vision-Language Models (VLMs), such as Low-Rank Adaptation (LoRA) from Parameter Efficient Fine-Tuning (PEFT), have made impressive progress. However, most approaches rely on explicit weight updates, overlooking…

机器学习 · 计算机科学 2025-12-30 Mingyuan Zhang , Yue Bai , Yifan Wang , Yiyang Huang , Yun Fu

Biomedical literature is a rapidly expanding field of science and technology. Classification of biomedical texts is an essential part of biomedicine research, especially in the field of biology. This work proposes the fine-tuned DistilBERT,…

计算与语言 · 计算机科学 2024-04-23 Ziqing Guo

Length generalization, the ability to solve problems longer than those seen during training, remains a critical challenge for large language models (LLMs). Previous work modifies positional encodings (PEs) and data formats to improve length…

计算与语言 · 计算机科学 2025-05-20 Yi Hu , Shijia Kang , Haotong Yang , Haotian Xu , Muhan Zhang

Motivation: A perennial challenge for biomedical researchers and clinical practitioners is to stay abreast with the rapid growth of publications and medical notes. Natural language processing (NLP) has emerged as a promising direction for…

计算与语言 · 计算机科学 2021-12-16 Robert Tinn , Hao Cheng , Yu Gu , Naoto Usuyama , Xiaodong Liu , Tristan Naumann , Jianfeng Gao , Hoifung Poon

Post-training has demonstrated its importance in enhancing the reasoning capabilities of large language models (LLMs). The primary post-training methods can be categorized into supervised fine-tuning (SFT) and reinforcement fine-tuning…

机器学习 · 计算机科学 2025-10-21 Mingyang Liu , Gabriele Farina , Asuman Ozdaglar

Large Language Models (LLMs) are increasingly adopted for complex scientific text generation tasks, yet they often suffer from limitations in accuracy, consistency, and hallucination control. This thesis introduces a Parameter-Efficient…

计算与语言 · 计算机科学 2024-11-12 Daniil Sulimov

Supervised fine-tuning (SFT) is crucial for adapting Large Language Models (LLMs) to specific tasks. In this work, we demonstrate that the order of training data can lead to significant training imbalances, potentially resulting in…

计算与语言 · 计算机科学 2024-10-08 Yiming Ju , Ziyi Ni , Xingrun Xing , Zhixiong Zeng , hanyu Zhao , Siqi Fan , Zheng Zhang

Recent advances in large language models (LLMs) and biomedical foundation models (BioFMs) have achieved strong results in biological text reasoning, molecular modeling, and single-cell analysis, yet they remain siloed in disjoint embedding…

定量方法 · 定量生物学 2025-10-03 Ching-Huei Tsou , Michal Ozery-Flato , Ella Barkan , Diwakar Mahajan , Ben Shapira

Existing LLMs-post-training techniques are broadly categorized into supervised fine-tuning (SFT) and reinforcement fine-tuning (RFT). Each paradigm presents a distinct trade-off: (1) SFT excels at mimicking demonstration data, but can lead…

机器学习 · 计算机科学 2026-05-18 Zeyu Huang , Tianhao Cheng , Zihan Qiu , Zili Wang , Yinghui Xu , Edoardo M. Ponti , Ivan Titov

Supervised fine-tuning (SFT) provides the standard approach for teaching LLMs new behaviors from offline expert demonstrations. However, standard SFT uniformly fits all samples -- including those with low likelihood under the base model --…

机器学习 · 计算机科学 2026-05-15 Mahdi Sabbaghi , George Pappas , Adel Javanmard , Hamed Hassani

The rapid advancement of large language models (LLMs) in biological-medical applications has highlighted a gap between their potential and the limited scale and often low quality of available open-source annotated textual datasets. In…

计算与语言 · 计算机科学 2025-12-19 Xunxin Cai , Chengrui Wang , Qingqing Long , Yuanchun Zhou , Meng Xiao

Federated fine-tuning enables Large Language Models (LLMs) to adapt to downstream tasks while preserving data privacy, but its resource-intensive nature limits deployment on edge devices. In this paper, we introduce Developmental Federated…

机器学习 · 计算机科学 2025-08-04 Yebo Wu , Jingguang Li , Zhijiang Guo , Li Li

Existing methods for fine-tuning sparse LLMs often suffer from resource-intensive requirements and high retraining costs. Additionally, many fine-tuning methods often rely on approximations or heuristic optimization strategies, which may…

机器学习 · 计算机科学 2024-02-21 Song Guo , Fan Wu , Lei Zhang , Xiawu Zheng , Shengchuan Zhang , Fei Chao , Yiyu Shi , Rongrong Ji

Large Language Models (LLMs) are typically fine-tuned for reasoning tasks through a two-stage pipeline of Supervised Fine-Tuning (SFT) followed by Reinforcement Learning (RL), a process fraught with catastrophic forgetting and suboptimal…

机器学习 · 计算机科学 2025-10-13 Lixuan He , Jie Feng , Yong Li

When using supervised fine-tuning (SFT) to adapt large language models (LLMs) to specific domains, a significant challenge arises: should we use the entire SFT dataset for fine-tuning? Common practice often involves fine-tuning directly on…

计算与语言 · 计算机科学 2025-05-26 Xiang Liu , Zhaoxiang Liu , Peng Wang , Kohou Wang , Huan Hu , Kai Wang , Shiguo Lian
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