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Understanding communication and information processing among brain regions of interest (ROIs) is highly dependent on long-range connectivity, which plays a crucial role in facilitating diverse functional neural integration across the entire…

机器学习 · 计算机科学 2025-01-10 Shuo Yu , Shan Jin , Ming Li , Tabinda Sarwar , Feng Xia

-Background. Network neuroscience examines the brain as a complex system represented by a network (or connectome), providing deeper insights into the brain morphology and function, allowing the identification of atypical brain connectivity…

神经元与认知 · 定量生物学 2020-09-01 Mert Lostar , Islem Rekik

Developing interpretable models for neurodevelopmental disorders (NDDs) diagnosis presents significant challenges in effectively encoding, decoding, and integrating multimodal neuroimaging data. While many existing machine learning…

计算机视觉与模式识别 · 计算机科学 2026-04-24 Yueyang Li , Lei Chen , Wenhao Dong , Shengyu Gong , Zijian Kang , Boyang Wei , Weiming Zeng , Hongjie Yan , Lingbin Bian , Zhiguo Zhang , Wai Ting Siok , Nizhuan Wang

A major goal of neuroscience is to understand brain computations during visual processing in naturalistic settings. A dominant approach is to use image-computable deep neural networks trained with different task objectives as a basis for…

神经元与认知 · 定量生物学 2026-02-06 Hossein Adeli , Sun Minni , Nikolaus Kriegeskorte

The Transformer architecture has achieved remarkable success in a number of domains including natural language processing and computer vision. However, when it comes to graph-structured data, transformers have not achieved competitive…

机器学习 · 计算机科学 2022-10-11 Zaixi Zhang , Qi Liu , Qingyong Hu , Chee-Kong Lee

The Transformer architecture has gained growing attention in graph representation learning recently, as it naturally overcomes several limitations of graph neural networks (GNNs) by avoiding their strict structural inductive biases and…

机器学习 · 统计学 2022-06-14 Dexiong Chen , Leslie O'Bray , Karsten Borgwardt

Accurate user and item embedding learning is crucial for modern recommender systems. However, most existing recommendation techniques have thus far focused on modeling users' preferences over singular type of user-item interactions. Many…

信息检索 · 计算机科学 2021-10-11 Lianghao Xia , Chao Huang , Yong Xu , Peng Dai , Xiyue Zhang , Hongsheng Yang , Jian Pei , Liefeng Bo

Graphs are the most ubiquitous data structures for representing relational datasets and performing inferences in them. They model, however, only pairwise relations between nodes and are not designed for encoding the higher-order relations.…

机器学习 · 计算机科学 2021-09-23 Devanshu Arya , Deepak K. Gupta , Stevan Rudinac , Marcel Worring

Link Prediction on Hyper-relational Knowledge Graphs (HKG) is a worthwhile endeavor. HKG consists of hyper-relational facts (H-Facts), composed of a main triple and several auxiliary attribute-value qualifiers, which can effectively…

人工智能 · 计算机科学 2023-10-17 Haoran Luo , Haihong E , Yuhao Yang , Yikai Guo , Mingzhi Sun , Tianyu Yao , Zichen Tang , Kaiyang Wan , Meina Song , Wei Lin

Non-hierarchical sparse attention Transformer-based models, such as Longformer and Big Bird, are popular approaches to working with long documents. There are clear benefits to these approaches compared to the original Transformer in terms…

计算与语言 · 计算机科学 2022-10-12 Ilias Chalkidis , Xiang Dai , Manos Fergadiotis , Prodromos Malakasiotis , Desmond Elliott

Generating realistic synthetic electronic health records (EHRs) holds tremendous promise for accelerating healthcare research, facilitating AI model development and enhancing patient privacy. However, existing generative methods typically…

机器学习 · 计算机科学 2025-07-28 Guanglin Zhou , Sebastiano Barbieri

The dynamic characterization of functional brain networks is of great significance for elucidating the mechanisms of human brain function. Although graph neural networks have achieved remarkable progress in functional network analysis,…

机器学习 · 计算机科学 2025-04-08 ZhiTeng Zhu , Lan Yao

Recent studies have highlighted the limitations of message-passing based graph neural networks (GNNs), e.g., limited model expressiveness, over-smoothing, over-squashing, etc. To alleviate these issues, Graph Transformers (GTs) have been…

机器学习 · 计算机科学 2023-03-06 Qiheng Mao , Zemin Liu , Chenghao Liu , Jianling Sun

Studying influential nodes (I-nodes) in brain networks is of great significance in the field of brain imaging. Most existing studies consider brain connectivity hubs as I-nodes. However, this approach relies heavily on prior knowledge from…

神经元与认知 · 定量生物学 2024-09-18 Yanqing Kang , Di Zhu , Haiyang Zhang , Enze Shi , Sigang Yu , Jinru Wu , Xuhui Wang , Xuan Liu , Geng Chen , Xi Jiang , Tuo Zhang , Shu Zhang

Mapping the connectome of the human brain using structural or functional connectivity has become one of the most pervasive paradigms for neuroimaging analysis. Recently, Graph Neural Networks (GNNs) motivated from geometric deep learning…

神经元与认知 · 定量生物学 2022-11-30 Hejie Cui , Wei Dai , Yanqiao Zhu , Xuan Kan , Antonio Aodong Chen Gu , Joshua Lukemire , Liang Zhan , Lifang He , Ying Guo , Carl Yang

Recently, medical report generation, which aims to automatically generate a long and coherent descriptive paragraph of a given medical image, has received growing research interests. Different from the general image captioning tasks,…

图像与视频处理 · 电气工程与系统科学 2022-03-22 Di You , Fenglin Liu , Shen Ge , Xiaoxia Xie , Jing Zhang , Xian Wu

Transformers have set new benchmarks in audio processing tasks, leveraging self-attention mechanisms to capture complex patterns and dependencies within audio data. However, their focus on pairwise interactions limits their ability to…

声音 · 计算机科学 2025-01-30 Shubhr Singh , Emmanouil Benetos , Huy Phan , Dan Stowell

Graph neural networks (GNNs) based on message passing between neighboring nodes are known to be insufficient for capturing long-range interactions in graphs. In this project we study hierarchical message passing models that leverage a…

机器学习 · 计算机科学 2021-08-17 Ladislav Rampášek , Guy Wolf

We propose the Quantum Graph Attention Network (QGAT), a hybrid graph neural network that integrates variational quantum circuits into the attention mechanism. At its core, QGAT employs strongly entangling quantum circuits with…

机器学习 · 计算机科学 2025-08-29 An Ning , Tai Yue Li , Nan Yow Chen

Graph transformers need strong inductive biases to derive meaningful attention scores. Yet, current methods often fall short in capturing longer ranges, hierarchical structures, or community structures, which are common in various graphs…

机器学习 · 计算机科学 2024-05-28 Yuankai Luo , Hongkang Li , Lei Shi , Xiao-Ming Wu