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We present a new text-to-SQL dataset for electronic health records (EHRs). The utterances were collected from 222 hospital staff members, including physicians, nurses, and insurance review and health records teams. To construct the QA…

计算与语言 · 计算机科学 2026-03-06 Gyubok Lee , Hyeonji Hwang , Seongsu Bae , Yeonsu Kwon , Woncheol Shin , Seongjun Yang , Minjoon Seo , Jong-Yeup Kim , Edward Choi

Extracting insights from Electronic Health Record (EHR) databases often requires SQL expertise, creating a barrier for clinical decision-making and research. A promising approach is to use Large Language Models (LLMs) to translate natural…

信息检索 · 计算机科学 2026-04-21 Hung Nguyen , Hans Moen , Pekka Marttinen

Current self-correction approaches in text-to-SQL face two critical limitations: 1) Conventional self-correction methods rely on recursive self-calls of LLMs, resulting in multiplicative computational overhead, and 2) LLMs struggle to…

计算与语言 · 计算机科学 2025-06-03 Ge Qu , Jinyang Li , Bowen Qin , Xiaolong Li , Nan Huo , Chenhao Ma , Reynold Cheng

Currently, long-chain reasoning remains a key challenge for large language models (LLMs) because natural texts lack sufficient explicit reasoning data. However, existing benchmarks suffer from limitations such as narrow coverage, short…

Text-to-SQL models are pivotal for making Electronic Health Records (EHRs) accessible to healthcare professionals without SQL knowledge. With the advancements in large language models, these systems have become more adept at translating…

计算与语言 · 计算机科学 2024-05-21 Yongrae Jo , Seongyun Lee , Minju Seo , Sung Ju Hwang , Moontae Lee

Data consistency between unstructured clinical notes and structured tables in Electronic Health Records (EHRs) is essential for patient safety and clinical decision-making. However, existing work on note-table consistency verification…

Despite the impressive performance of LLM-powered agents, their adoption for Electronic Health Record (EHR) data access remains limited by the absence of benchmarks that adequately capture real-world clinical data access flows. In practice,…

人工智能 · 计算机科学 2026-03-03 Gyubok Lee , Woosog Chay , Heeyoung Kwak , Yeong Hwa Kim , Haanju Yoo , Oksoon Jeong , Meong Hi Son , Edward Choi

The use of Large Language Models (LLMs) to support patients in addressing medical questions is becoming increasingly prevalent. However, most of the measures currently used to evaluate the performance of these models in this context only…

人机交互 · 计算机科学 2026-04-22 Abu Noman Md Sakib , Md. Main Oddin Chisty , Zijie Zhang

Electronic Health Records (EHR) offer rich real-world data for personalized medicine, providing insights into disease progression, treatment responses, and patient outcomes. However, their sparsity, heterogeneity, and high dimensionality…

统计方法学 · 统计学 2025-05-28 Linshanshan Wang , Mengyan Li , Zongqi Xia , Molei Liu , Tianxi Cai

Rubrics are essential for evaluating open-ended LLM responses, especially in safety-critical domains such as healthcare. However, creating high-quality and domain-specific rubrics typically requires significant human expertise time and…

Text-to-SQL enables users to interact with databases using natural language, simplifying the retrieval and synthesis of information. Despite the remarkable success of large language models (LLMs) in translating natural language questions…

人工智能 · 计算机科学 2024-07-03 Gyubok Lee , Woosog Chay , Seonhee Cho , Edward Choi

Typical evaluations of Large Language Models (LLMs) report a single metric per dataset, often representing the model's best-case performance under carefully selected settings. Unfortunately, this approach overlooks model robustness and…

计算与语言 · 计算机科学 2025-03-04 Grigor Nalbandyan , Rima Shahbazyan , Evelina Bakhturina

Clinical semantic parsing (SP) is an important step toward identifying the exact information need (as a machine-understandable logical form) from a natural language query aimed at retrieving information from electronic health records…

计算与语言 · 计算机科学 2022-11-10 Sarvesh Soni , Kirk Roberts

Multi-modal generative document parsing systems challenge traditional evaluation: unlike deterministic OCR or layout models, they often produce semantically correct yet structurally divergent outputs. Conventional metrics-CER, WER, IoU, or…

计算与语言 · 计算机科学 2025-09-25 Renyu Li , Antonio Jimeno Yepes , Yao You , Kamil Pluciński , Maximilian Operlejn , Crag Wolfe

Electronic health records (EHRs) are central to modern healthcare delivery and research; yet, many researchers lack the database expertise necessary to write complex SQL queries or generate effective visualizations, limiting efficient data…

Multimodal large language models (MLLMs) demonstrate considerable potential in clinical diagnostics, a domain that inherently requires synthesizing complex visual and textual data alongside consulting authoritative medical literature.…

计算与语言 · 计算机科学 2026-03-23 Yannian Gu , Zhongzhen Huang , Linjie Mu , Xizhuo Zhang , Shaoting Zhang , Xiaofan Zhang

While large language models (LLMs) achieve strong performance on text-to-SQL parsing, they sometimes exhibit unexpected failures in which they are confidently incorrect. Building trustworthy text-to-SQL systems thus requires eliciting…

计算与语言 · 计算机科学 2025-09-18 Terrance Liu , Shuyi Wang , Daniel Preotiuc-Pietro , Yash Chandarana , Chirag Gupta

Discharge summaries in Electronic Health Records (EHRs) are crucial for clinical decision-making, but their length and complexity make information extraction challenging, especially when dealing with accumulated summaries across multiple…

计算与语言 · 计算机科学 2024-11-12 Sunjun Kweon , Jiyoun Kim , Heeyoung Kwak , Dongchul Cha , Hangyul Yoon , Kwanghyun Kim , Jeewon Yang , Seunghyun Won , Edward Choi

Evaluation of QA systems is very challenging and expensive, with the most reliable approach being human annotations of correctness of answers for questions. Recent works (AVA, BEM) have shown that transformer LM encoder based similarity…

计算与语言 · 计算机科学 2023-09-22 Matteo Gabburo , Siddhant Garg , Rik Koncel Kedziorski , Alessandro Moschitti

Large language models (LLMs) hold great promise for medical applications and are evolving rapidly, with new models being released at an accelerated pace. However, benchmarking on large-scale real-world data such as electronic health records…

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