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We present an attention-based spatial graph convolution (AGC) for graph neural networks (GNNs). Existing AGCs focus on only using node-wise features and utilizing one type of attention function when calculating attention weights. Instead,…

计算机视觉与模式识别 · 计算机科学 2023-03-06 Yang Li , Yuichi Tanaka

Graph neural networks (GNNs) have shown promising results across various graph learning tasks, but they often assume homophily, which can result in poor performance on heterophilic graphs. The connected nodes are likely to be from different…

机器学习 · 计算机科学 2023-05-31 Kai Zhao , Qiyu Kang , Yang Song , Rui She , Sijie Wang , Wee Peng Tay

Graph representation learning for hypergraphs can be used to extract patterns among higher-order interactions that are critically important in many real world problems. Current approaches designed for hypergraphs, however, are unable to…

机器学习 · 计算机科学 2019-11-11 Ruochi Zhang , Yuesong Zou , Jian Ma

Heterogeneous graphs (HGs) also known as heterogeneous information networks have become ubiquitous in real-world scenarios; therefore, HG embedding, which aims to learn representations in a lower-dimension space while preserving the…

社会与信息网络 · 计算机科学 2020-12-02 Xiao Wang , Deyu Bo , Chuan Shi , Shaohua Fan , Yanfang Ye , Philip S. Yu

Advances in bioinformatics are primarily due to new algorithms for processing diverse biological data sources. While sophisticated alignment algorithms have been pivotal in analyzing biological sequences, deep learning has substantially…

Learning representations for graphs plays a critical role in a wide spectrum of downstream applications. In this paper, we summarize the limitations of the prior works in three folds: representation space, modeling dynamics and modeling…

机器学习 · 计算机科学 2021-04-07 Li Sun , Zhongbao Zhang , Jiawei Zhang , Feiyang Wang , Hao Peng , Sen Su , Philip S. Yu

Heterogeneous graph neural network (HGNN) is a very popular technique for the modeling and analysis of heterogeneous graphs. Most existing HGNN-based approaches are supervised or semi-supervised learning methods requiring graphs to be…

机器学习 · 计算机科学 2023-11-17 Cuiying Huo , Dongxiao He , Yawen Li , Di Jin , Jianwu Dang , Weixiong Zhang , Witold Pedrycz , Lingfei Wu

This work presents the use of graph learning for the prediction of multi-step experimental outcomes for applications across experimental research, including material science, chemistry, and biology. The viability of geometric learning for…

机器学习 · 计算机科学 2024-08-13 Amanda A. Volk , Robert W. Epps , Jeffrey G. Ethier , Luke A. Baldwin

Hyperdimensional computing (HDC) is an emerging learning paradigm that computes with high dimensional binary vectors. It is attractive because of its energy efficiency and low latency, especially on emerging hardware -- but HDC suffers from…

机器学习 · 计算机科学 2023-01-06 Tao Yu , Yichi Zhang , Zhiru Zhang , Christopher De Sa

Predicting drug-gene associations is crucial for drug development and disease treatment. While graph neural networks (GNN) have shown effectiveness in this task, they face challenges with data sparsity and efficient contrastive learning…

机器学习 · 计算机科学 2025-02-14 Jiayang Wu , Wensheng Gan , Philip S. Yu

Heterogeneous graph neural networks (HeteGNNs) have demonstrated strong abilities to learn node representations by effectively extracting complex structural and semantic information in heterogeneous graphs. Most of the prevailing HeteGNNs…

机器学习 · 计算机科学 2025-05-08 Hong Jin , Kaicheng Zhou , Jie Yin , Lan You , Zhifeng Zhou

From social networks to protein complexes to disease genomes to visual data, hypergraphs are everywhere. However, the scope of research studying deep learning on hypergraphs is still quite sparse and nascent, as there has not yet existed an…

机器学习 · 计算机科学 2019-10-08 Josh Payne

Traffic flow forecasting is a highly challenging task due to the dynamic spatial-temporal road conditions. Graph neural networks (GNN) has been widely applied in this task. However, most of these GNNs ignore the effects of time-varying road…

机器学习 · 计算机科学 2023-07-13 Zhengdao Li , Wei Li , Kai Hwang

Diffusion generative models (DMs) have achieved promising results in image and graph generation. However, real-world graphs, such as social networks, molecular graphs, and traffic graphs, generally share non-Euclidean topologies and hidden…

机器学习 · 计算机科学 2024-01-04 Lingfeng Wen , Xuan Tang , Mingjie Ouyang , Xiangxiang Shen , Jian Yang , Daxin Zhu , Mingsong Chen , Xian Wei

Graph representation learning has attracted lots of attention recently. Existing graph neural networks fed with the complete graph data are not scalable due to limited computation and memory costs. Thus, it remains a great challenge to…

机器学习 · 计算机科学 2020-11-24 Yizhu Jiao , Yun Xiong , Jiawei Zhang , Yao Zhang , Tianqi Zhang , Yangyong Zhu

Federated learning (FL) enables a loose set of participating clients to collaboratively learn a global model via coordination by a central server and with no need for data sharing. Existing FL approaches that rely on complex algorithms with…

机器学习 · 计算机科学 2023-12-27 Kazim Ergun , Rishikanth Chandrasekaran , Tajana Rosing

Hypergraphs offer a generalized framework for capturing high-order relationships between entities and have been widely applied in various domains, including healthcare, social networks, and bioinformatics. Hypergraph neural networks, which…

机器学习 · 计算机科学 2025-12-03 Akash Choudhuri , Yongjian Zhong , Bijaya Adhikari

Heterogeneous Graph Neural Networks (HGNNs) are powerful tools for deep learning on heterogeneous graphs. Typical HGNNs require repetitive message passing during training, limiting efficiency for large-scale real-world graphs. Recent…

机器学习 · 计算机科学 2024-09-04 Jun Hu , Bryan Hooi , Bingsheng He

Graph neural networks have recently achieved remarkable success in representing graph-structured data, with rapid progress in both the node embedding and graph pooling methods. Yet, they mostly focus on capturing information from the nodes…

机器学习 · 计算机科学 2021-11-01 Jaehyeong Jo , Jinheon Baek , Seul Lee , Dongki Kim , Minki Kang , Sung Ju Hwang

Learning universal graph representations across heterogeneous domains is difficult because graph datasets differ in topology, node-attribute semantics, feature dimensions, and even attribute availability. We propose GraphVec, a…

机器学习 · 计算机科学 2026-05-08 Qi Feng , Jicong Fan