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Metagenomic profiling is challenging in part because of the highly uneven sampling of the tree of life by genome sequencing projects and the limitations imposed by performing phylogenetic inference at fixed taxonomic ranks. We present the…

基因组学 · 定量生物学 2016-02-18 David Koslicki , Daniel Falush

It is complicated to distinguish among thousands of plant species in the natural ecosystem, and many efforts have been investigated to address the issue. In Vietnam, the task of identifying one from 12,000 species requires specialized…

计算机视觉与模式识别 · 计算机科学 2020-05-07 Nguyen Van Hieu , Ngo Le Huy Hien

Automated apple harvesting has attracted significant research interest in recent years due to its potential to revolutionize the apple industry, addressing the issues of shortage and high costs in labor. One key technology to fully enable…

计算机视觉与模式识别 · 计算机科学 2023-03-10 Pengyu Chu , Zhaojian Li , Kaixiang Zhang , Dong Chen , Kyle Lammers , Renfu Lu

Plant diseases significantly impact agricultural productivity, resulting in economic losses and food insecurity. Prompt and accurate detection is crucial for the efficient management and mitigation of plant diseases. This study investigates…

计算机与社会 · 计算机科学 2024-11-22 Md Aziz Hosen Foysal , Foyez Ahmed , Md Zahurul Haque

A computational challenge to validate the candidate disease genes identified in a high-throughput genomic study is to elucidate the associations between the set of candidate genes and disease phenotypes. The conventional gene set enrichment…

基因组学 · 定量生物学 2011-02-22 TaeHyun Hwang , Wei Zhang , Maoqiang Xie , Rui Kuang

Plant diseases pose a significant threat to global food security, necessitating accurate and interpretable disease detection methods. This study introduces an interpretable attention-guided Convolutional Neural Network (CNN), CBAM-VGG16,…

计算机视觉与模式识别 · 计算机科学 2025-12-25 Balram Singh , Ram Prakash Sharma , Somnath Dey

The pests captured with imaging devices may be relatively small in size compared to the entire images, and complex backgrounds have colors and textures similar to those of the pests, which hinders accurate feature extraction and makes pest…

计算机视觉与模式识别 · 计算机科学 2025-07-11 Ga-Eun Kim , Chang-Hwan Son

Insects comprise millions of species, many experiencing severe population declines under environmental and habitat changes. High-throughput approaches are crucial for accelerating our understanding of insect diversity, with DNA barcoding…

Palms play an outsized role in tropical forests and are important resources for humans and wildlife. A central question in tropical ecosystems is understanding palm distribution and abundance. However, accurately identifying and localizing…

计算机视觉与模式识别 · 计算机科学 2024-03-06 Kangning Cui , Zishan Shao , Gregory Larsen , Victor Pauca , Sarra Alqahtani , David Segurado , João Pinheiro , Manqi Wang , David Lutz , Robert Plemmons , Miles Silman

Herb classification presents a critical challenge in botanical research, particularly in regions with rich biodiversity such as Nepal. This study introduces a novel deep learning approach for classifying 60 different herb species using…

机器学习 · 计算机科学 2025-05-06 Prajwal Thapa , Mridul Sharma , Jinu Nyachhyon , Yagya Raj Pandeya

The early identification of diseases in cocoa pods is an important task to guarantee the production of high-quality cocoa. The use of artificial intelligence techniques such as machine learning, computer vision and deep learning are…

计算机视觉与模式识别 · 计算机科学 2024-01-03 Darlyn Buenaño Vera , Byron Oviedo , Washington Chiriboga Casanova , Cristian Zambrano-Vega

For a globally recognized planting breeding organization, manually-recorded field observation data is crucial for plant breeding decision making. However, certain phenotypic traits such as plant color, height, kernel counts, etc. can only…

计算机视觉与模式识别 · 计算机科学 2021-03-23 Saeed Khaki , Nima Safaei , Hieu Pham , Lizhi Wang

As AI systems grow more capable, it becomes increasingly important that their decisions remain understandable and aligned with human expectations. A key challenge is the limited interpretability of deep models. Post-hoc methods like GradCAM…

计算机视觉与模式识别 · 计算机科学 2025-11-21 Mahdi Alehdaghi , Rajarshi Bhattacharya , Pourya Shamsolmoali , Rafael M. O. Cruz , Maguelonne Heritier , Eric Granger

Accurate and timely identification of plant leaf diseases is essential for resilient and sustainable agriculture, yet most deep learning approaches rely on large annotated datasets and computationally intensive models that are unsuitable…

计算机视觉与模式识别 · 计算机科学 2025-12-16 Anika Islam , Tasfia Tahsin , Zaarin Anjum , Md. Bakhtiar Hasan , Md. Hasanul Kabir

Accurate classification of celestial objects is essential for advancing our understanding of the universe. MargNet is a recently developed deep learning-based classifier applied to SDSS DR16 dataset to segregate stars, quasars, and compact…

天体物理仪器与方法 · 物理学 2024-08-29 Srinadh Reddy Bhavanam , Sumohana S. Channappayya , P. K. Srijith , Shantanu Desai

Fine-grained fruit classification is a critical yet challenging task in agricultural computer vision, primarily hindered by a severe shortage of high-quality datasets and the high visual similarity between classes. To address these…

计算机视觉与模式识别 · 计算机科学 2026-05-21 Enhui Yu , Junhui Li , Ruitong Lu , Jialu Li , Youshan Zhang

Retinal image plays a crucial role in diagnosing various diseases, as retinal structures provide essential diagnostic information. However, effectively capturing structural features while integrating them with contextual information from…

图像与视频处理 · 电气工程与系统科学 2025-03-04 Xinwei Luo , Songlin Zhao , Yun Zong , Yong Chen , Gui-shuang Ying , Lifang He

This paper presents results on the detection and identification mango fruits from colour images of trees. We evaluate the behaviour and the performances of the Faster R-CNN network to determine whether it is robust enough to "detect and…

计算机视觉与模式识别 · 计算机科学 2019-09-25 Philippe Borianne , Frederic Borne , Julien Sarron , Emile Faye

Pest counting, which predicts the number of pests in the early stage, is very important because it enables rapid pest control, reduces damage to crops, and improves productivity. In recent years, light traps have been increasingly used to…

计算机视觉与模式识别 · 计算机科学 2023-04-06 Jae-Hyeon Lee , Chang-Hwan Son

In view of the recent paradigm shift in deep AI based image processing methods, medical image processing has advanced considerably. In this study, we propose a novel deep neural network (DNN), entitled InceptNet, in the scope of medical…

图像与视频处理 · 电气工程与系统科学 2023-09-06 Amirhossein Sajedi , Mohammad Javad Fadaeieslam