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Projection algorithms such as t-SNE or UMAP are useful for the visualization of high dimensional data, but depend on hyperparameters which must be tuned carefully. Unfortunately, iteratively recomputing projections to find the optimal…

机器学习 · 计算机科学 2021-06-28 Gabriel Appleby , Mateus Espadoto , Rui Chen , Samuel Goree , Alexandru Telea , Erik W Anderson , Remco Chang

This paper investigates the theoretical foundations of the t-distributed stochastic neighbor embedding (t-SNE) algorithm, a popular nonlinear dimension reduction and data visualization method. A novel theoretical framework for the analysis…

机器学习 · 统计学 2022-11-02 T. Tony Cai , Rong Ma

Unsupervised homogeneous network embedding (NE) represents every vertex of networks into a low-dimensional vector and meanwhile preserves the network information. Adjacency matrices retain most of the network information, and directly…

社会与信息网络 · 计算机科学 2020-03-06 Luoyi Zhang , Ming Xu

The t-distributed Stochastic Neighbor Embedding (tSNE) algorithm has become in recent years one of the most used and insightful techniques for the exploratory data analysis of high-dimensional data. tSNE reveals clusters of high-dimensional…

In contrast to classical techniques for exploratory analysis of high-dimensional data sets, such as principal component analysis (PCA), neighbor embedding (NE) techniques tend to better preserve the local structure/topology of…

机器学习 · 统计学 2022-09-07 Roman Josef Rainer , Michael Mayr , Johannes Himmelbauer , Ramin Nikzad-Langerodi

Most existing graph visualization methods based on dimension reduction are limited to relatively small graphs due to performance issues. In this work, we propose a novel dimension reduction method for graph visualization, called…

机器学习 · 计算机科学 2023-10-18 Xinyu Li , Yao Xiao , Yuchen Zhou

We introduce FastGraph, a novel GPU-optimized k-nearest neighbor algorithm specifically designed to accelerate graph construction in low-dimensional spaces (2-10 dimensions), critical for high-performance graph neural networks. Our method…

分布式、并行与集群计算 · 计算机科学 2025-11-14 Aarush Agarwal , Raymond He , Jan Kieseler , Matteo Cremonesi , Shah Rukh Qasim

Interactive exploration of large, multidimensional datasets plays a very important role in various scientific fields. It makes it possible not only to identify important structural features and forms, such as clusters of vertices and their…

机器学习 · 计算机科学 2023-03-10 Bartosz Minch

The t-distributed Stochastic Neighbor Embedding (t-SNE) algorithm is a ubiquitously employed dimensionality reduction (DR) method. Its non-parametric nature and impressive efficacy motivated its parametric extension. It is however bounded…

机器学习 · 计算机科学 2020-10-06 Francesco Crecchi , Cyril de Bodt , Michel Verleysen , John A. Lee , Davide Bacciu

The t-distributed Stochastic Neighbor Embedding (t-SNE) is a powerful and popular method for visualizing high-dimensional data. It minimizes the Kullback-Leibler (KL) divergence between the original and embedded data distributions. In this…

机器学习 · 计算机科学 2018-11-06 Daniel Jiwoong Im , Nakul Verma , Kristin Branson

Fixed-radius near neighbor search is a fundamental data operation that retrieves all data points within a user-specified distance to a query point. There are efficient algorithms that can provide fast approximate query responses, but they…

信息检索 · 计算机科学 2024-01-30 Xinye Chen , Stefan Güttel

Stochastic neighbor embedding (SNE) methods $t$-SNE, UMAP are two most popular dimensionality reduction methods for data visualization. Contrastive learning, especially self-supervised contrastive learning (SSCL), has showed great success…

机器学习 · 计算机科学 2023-09-18 Yi Zhang

t-Stochastic Neighbor Embedding (t-SNE) is a non-parametric data visualization method in classical machine learning. It maps the data from the high-dimensional space into a low-dimensional space, especially a two-dimensional plane, while…

量子物理 · 物理学 2022-02-10 Yoshiaki Kawase , Kosuke Mitarai , Keisuke Fujii

$k$-Nearest Neighbor search on dense vector embeddings ($k$-NN retrieval) from pre-trained embedding models is the predominant retrieval method for text and images, as well as Retrieval-Augmented Generation (RAG) pipelines. In practice,…

机器学习 · 计算机科学 2024-09-05 Sepanta Zeighami , Zac Wellmer , Aditya Parameswaran

The objective of this paper is to design an embedding method that maps local features describing an image (e.g. SIFT) to a higher dimensional representation useful for the image retrieval problem. First, motivated by the relationship…

计算机视觉与模式识别 · 计算机科学 2017-04-05 Thanh-Toan Do , Ngai-Man Cheung

Parametric embedding methods such as parametric t-SNE (pt-SNE) have been widely adopted for data visualization and out-of-sample data embedding without further computationally expensive optimization or approximation. However, the…

机器学习 · 计算机科学 2018-04-24 Martin Renqiang Min , Hongyu Guo , Dinghan Shen

Dimension reduction, widely used in science, maps high-dimensional data into low-dimensional space. We investigate a basic mathematical model underlying the techniques of stochastic neighborhood embedding (SNE) and its popular variant…

机器学习 · 统计学 2025-03-26 Ben Weinkove

Dimensional data reduction methods are fundamental to explore and visualize large data sets. Basic requirements for unsupervised data exploration are simplicity, flexibility and scalability. However, current methods show complex…

机器学习 · 计算机科学 2021-12-03 Joan Garriga , Frederic Bartumeus

Conditional t-SNE (ct-SNE) is a recent extension to t-SNE that allows removal of known cluster information from the embedding, to obtain a visualization revealing structure beyond label information. This is useful, for example, when one…

机器学习 · 计算机科学 2023-04-12 Edith Heiter , Bo Kang , Ruth Seurinck , Jefrey Lijffijt

Approximate nearest neighbor (ANN) search in high dimensions is an integral part of several computer vision systems and gains importance in deep learning with explicit memory representations. Since PQT, FAISS, and SONG started to leverage…

计算机视觉与模式识别 · 计算机科学 2022-04-08 Fabian Groh , Lukas Ruppert , Patrick Wieschollek , Hendrik P. A. Lensch