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Accurate prediction of molecular solubility is a cornerstone of early-stage drug discovery, yet conventional machine learning models face significant challenges due to limited labeled data and the high-dimensional nature of molecular…

定量方法 · 定量生物学 2025-06-03 Mohammad Saleh Hasankhani

Generating novel graph structures that optimize given objectives while obeying some given underlying rules is fundamental for chemistry, biology and social science research. This is especially important in the task of molecular graph…

机器学习 · 计算机科学 2019-02-26 Jiaxuan You , Bowen Liu , Rex Ying , Vijay Pande , Jure Leskovec

Finetuning a Large Language Model (LLM) is crucial for generating results towards specific objectives. This research delves into the realm of drug optimization and introduce a novel reinforcement learning algorithm to finetune a drug…

机器学习 · 计算机科学 2025-02-12 Xuefeng Liu , Songhao Jiang , Siyu Chen , Zhuoran Yang , Yuxin Chen , Ian Foster , Rick Stevens

Visual Place Recognition (VPR) is a critical task for performing global re-localization in visual perception systems. It requires the ability to accurately recognize a previously visited location under variations such as illumination,…

计算机视觉与模式识别 · 计算机科学 2023-12-15 Oliver Grainge , Michael Milford , Indu Bodala , Sarvapali D. Ramchurn , Shoaib Ehsan

Variational auto-encoders (VAEs) provide an attractive solution to image generation problem. However, they tend to produce blurred and over-smoothed images due to their dependence on pixel-wise reconstruction loss. This paper introduces a…

计算机视觉与模式识别 · 计算机科学 2018-04-30 Salman H. Khan , Munawar Hayat , Nick Barnes

The global pandemic due to emergence of COVID 19 has created the unrivaled public health crisis. It has huge morbidity rate never comprehended in the recent decades. Researchers have made many efforts to find the optimal solution of this…

定量方法 · 定量生物学 2024-09-26 Imra Aqeel

Deep generative models have been widely used for their ability to generate realistic data samples in various areas, such as images, molecules, text, and speech. One major goal of data generation is controllability, namely to generate new…

机器学习 · 计算机科学 2023-10-12 Bo Pan , Muran Qin , Shiyu Wang , Yifei Zhang , Liang Zhao

Deep generative chemistry models emerge as powerful tools to expedite drug discovery. However, the immense size and complexity of the structural space of all possible drug-like molecules pose significant obstacles, which could be overcome…

量子物理 · 物理学 2023-08-15 A. I. Gircha , A. S. Boev , K. Avchaciov , P. O. Fedichev , A. K. Fedorov

Our work tackles the computational challenges of contrastive learning methods, particularly for the pretraining of Vision Transformers (ViTs). Despite the effectiveness of contrastive learning, the substantial computational resources…

计算机视觉与模式识别 · 计算机科学 2024-11-01 Jinhong Lin , Cheng-En Wu , Yibing Wei , Pedro Morgado

Weakly Supervised Object Detection (WSOD) with only image-level annotation has recently attracted wide attention. Many existing methods ignore the inter-image relationship of instances which share similar characteristics while can certainly…

计算机视觉与模式识别 · 计算机科学 2024-06-28 Yu Zhang , Chuang Zhu , Guoqing Yang , Siqi Chen

The design/discovery of new materials is highly non-trivial owing to the near-infinite possibilities of material candidates, and multiple required property/performance objectives. Thus, machine learning tools are now commonly employed to…

软凝聚态物质 · 物理学 2020-11-06 Rohit Batra , Hanjun Dai , Tran Doan Huan , Lihua Chen , Chiho Kim , Will R. Gutekunst , Le Song , Rampi Ramprasad

Predicting the chemical properties of compounds is crucial in discovering novel materials and drugs with specific desired characteristics. Recent significant advances in machine learning technologies have enabled automatic predictive…

定量方法 · 定量生物学 2021-12-10 Yang Liu , Hisashi Kashima

Finding drug-like compounds with high bioactivity is essential for drug discovery, but the task is complicated by the high cost of chemical synthesis and validation. With their outstanding performance in de novo drug design, deep generative…

定量方法 · 定量生物学 2023-01-03 Yibo Li , Jianfeng Pei , Luhua Lai

Designing new molecules with a set of predefined properties is a core problem in modern drug discovery and development. There is a growing need for de-novo design methods that would address this problem. We present MolecularRNN, the graph…

机器学习 · 计算机科学 2019-06-03 Mariya Popova , Mykhailo Shvets , Junier Oliva , Olexandr Isayev

Machine learning has the potential to automate molecular design and drastically accelerate the discovery of new functional compounds. Towards this goal, generative models and reinforcement learning (RL) using string and graph…

机器学习 · 计算机科学 2022-02-02 Daniel Flam-Shepherd , Alexander Zhigalin , Alán Aspuru-Guzik

Molecular Representation Learning is essential to solving many drug discovery and computational chemistry problems. It is a challenging problem due to the complex structure of molecules and the vast chemical space. Graph representations of…

机器学习 · 计算机科学 2023-01-18 Atia Hamidizadeh , Tony Shen , Martin Ester

Unsupervised representation learning has recently received lots of interest due to its powerful generalizability through effectively leveraging large-scale unlabeled data. There are two prevalent approaches for this, contrastive learning…

机器学习 · 计算机科学 2021-06-14 Saehoon Kim , Sungwoong Kim , Juho Lee

Generating as diverse molecules as possible with desired properties is crucial for drug discovery research, which invokes many approaches based on deep generative models today. Despite recent advancements in these models, particularly in…

机器学习 · 计算机科学 2024-07-17 Changhun Lee , Gyumin Lee

Machine learning approaches have become popular for molecular modeling tasks, including molecular force fields and properties prediction. Traditional supervised learning methods suffer from scarcity of labeled data for particular tasks,…

化学物理 · 物理学 2022-11-29 Xiang Gao , Weihao Gao , Wenzhi Xiao , Zhirui Wang , Chong Wang , Liang Xiang

In this work, we introduce Auxiliary Discriminator Sequence Generative Adversarial Networks (ADSeqGAN), a novel approach for molecular generation in small-sample datasets. Traditional generative models often struggle with limited training…

机器学习 · 计算机科学 2025-09-15 Haocheng Tang , Jing Long , Beihong Ji , Junmei Wang
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