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A model of multicellular systems with several types of cells is developed from the phase field model. The model is presented as a set of partial differential equations of the field variables, each of which expresses the shape of one cell.…

生物物理 · 物理学 2015-05-30 Makiko Nonomura

We study the non-equilibrium dynamics of lipid membranes with proteins that actively pump ions across the membrane. We find that the activity leads to a fluctuating force distribution due to electrostatic interactions arising from variation…

软凝聚态物质 · 物理学 2015-05-30 B. Loubet , M. A. Lomholt

Experiments and theory have shown that cell monolayers and epithelial tissues exhibit solid-liquid and glass-liquid transitions. These transitions are biologically relevant to our understanding of embryonic development, wound healing, and…

软凝聚态物质 · 物理学 2020-07-22 Benjamin Loewe , Michael Chiang , Davide Marenduzzo , M. Cristina Marchetti

The coordinated behaviors of epithelial cells are widely observed in tissue development, such as re-epithelialization, tumor growth, and morphogenesis. In these processes, cells either migrate collectively or organize themselves into…

软凝聚态物质 · 物理学 2022-08-30 Tiankai Zhao , Hongyan Yuan

In cell extrusion, a cell embedded in an epithelial monolayer loses its apical or basal surface and is subsequently squeezed out of the monolayer by neighboring cells. Cell extrusions occur during apoptosis, epithelial-mesenchymal…

细胞行为 · 定量生物学 2020-04-24 Satoru Okuda , Koichi Fujimoto

A phase-field model is used to capture the surfactant-driven formation of fracture patterns in particulate monolayers. The model is intended for the regime of closely-packed systems in which the mechanical response of the monolayer can be…

软凝聚态物质 · 物理学 2017-06-30 Christian Peco , Wei Chen , Yingjie Liu , M. M. Bandi , John E. Dolbow , Eliot Fried

A common situation in galactic and intergalactic gas involves cold dense gas in motion relative to hot diffuse gas. Kelvin-Helmholtz instability creates a turbulent mixing layer and populates the intermediate-temperature phase, which often…

星系天体物理 · 物理学 2020-05-20 Drummond B. Fielding , Eve C. Ostriker , Greg L. Bryan , Adam S. Jermyn

Cell monolayers and epithelial tissues display slow dynamics during the liquid-glass transitions, a phenomenon with direct relevance to embryogenesis, tumor metastases, and wound healing. In active cells, persistent motion and cell…

软凝聚态物质 · 物理学 2024-01-25 Meng-Yuan Li , Yan-Wei Li

Collective epithelial migration leverages on topological rearrangements of the intercellular junctions, which allow cells to intercalate without loosing confluency. In silico studies have provided a clear indication that this process could…

软凝聚态物质 · 物理学 2025-02-14 Leonardo Puggioni , Dimitrios Krommydas , Luca Giomi

Turbulent motions due to flux-driven thermal convection is investigated by numerical simulations and stochastic modelling. Tilting of convection cells leads to the formation of sheared flows and quasi-periodic relaxation oscillations for…

流体动力学 · 物理学 2020-08-26 G. Decristoforo , A. Theodorsen , O. E. Garcia

In this paper we study the equilibrium energy fluctuation field of a one-dimensional reversible non gradient model. We prove that the limit fluctuation process is governed by a generalized Ornstein- Uhlenbeck process, which covariances are…

概率论 · 数学 2010-07-01 Freddy Hernandez

Macroscopic properties and shapes of biological tissues depend on the remodelling of cell-cell junctions at the microscopic scale. We propose a theoretical framework that couples a vertex model of solid confluent tissues with the dynamics…

软凝聚态物质 · 物理学 2020-12-02 Clement Zankoc , Matej Krajnc

We investigate single-particle diffusion in a two-state Langevin model where the friction coefficient randomly switches between low-friction (liquid-like) and high-friction (glassy-like) states. The dynamics are governed by the ratio…

化学物理 · 物理学 2025-12-03 Fivos Perakis , Takeshi Kawasaki , Shinji Saito

While it is commonly observed that the shape dynamics of mammalian cells can undergo large random fluctuations, theoretical models aiming at capturing cell mechanics often focus on the deterministic part of the motion. In this paper, we…

生物物理 · 物理学 2021-04-07 Vikram Deshpande , Antonio DeSimone , Robert McMeeking , Pierre Recho

We propose a new methodology for the experimental measurement of the Onsager coefficients of porous media flows by application of the fluctuation-dissipation theorem. The experimental setup consists of a steady-state flow condition in which…

流体动力学 · 物理学 2024-10-07 Marcel Moura , Dick Bedeaux , Ryan T. Armstrong , Signe Kjelstrup

Cell layers eliminate unwanted cells through the extrusion process, which underlines healthy versus flawed tissue behaviors. Although several biochemical pathways have been identified, the underlying mechanical basis including the forces…

软凝聚态物质 · 物理学 2023-04-20 Siavash Monfared , Guruswami Ravichandran , Jose E. Andrade , Amin Doostmohammadi

Epithelial cells cultured in a monolayer are very motile in isolation but reach a near-jammed state when mitotic division increases their number above a critical threshold. We have recently shown that a monolayer can be reawakened by…

Collective modes of bilayered superconducting superlattices (e.g., YBCO) are investigated within the conserving gauge-invariant ladder diagram approximation including both the nearest interlayer single electron tunneling and the…

超导电性 · 物理学 2015-06-25 E. H. Hwang , S. Das Sarma

We discuss a theoretical model for bidirectional cargo transport in biological cells, which is driven by teams of molecular motors and subject to thermal fluctuations. The model describes explicitly the directed motion of the molecular…

生物物理 · 物理学 2017-09-20 Sarah Klein , Cécile Appert-Rolland , Ludger Santen

Many physical and biological systems rely on the progression of material through multiple independent stages. In viral replication, for example, virions enter a cell to undergo a complex process comprising several disparate stages before…

分子网络 · 定量生物学 2024-04-03 Alexander P Browning , Adrianne L Jenner , Ruth E Baker , Philip K Maini