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Background: Natural Language Processing (NLP) is widely used to extract clinical insights from Electronic Health Records (EHRs). However, the lack of annotated data, automated tools, and other challenges hinder the full utilisation of NLP…

计算与语言 · 计算机科学 2023-06-23 Elias Hossain , Rajib Rana , Niall Higgins , Jeffrey Soar , Prabal Datta Barua , Anthony R. Pisani , Ph. D , Kathryn Turner}

Electronic health records (EHRs) contain a vast amount of high-dimensional multi-modal data that can accurately represent a patient's medical history. Unfortunately, most of this data is either unstructured or semi-structured, rendering it…

计算与语言 · 计算机科学 2023-12-06 Ashwyn Sharma , David I. Feldman , Aneesh Jain

With the rapid advancement of Large Language Models (LLMs) and their outstanding performance in semantic and contextual comprehension, the potential of LLMs in specialized domains warrants exploration. This paper introduces the NoteAid EHR…

计算与语言 · 计算机科学 2024-01-01 Xiaocheng Zhang , Zonghai Yao , Hong Yu

Preterm labor is the leading cause of neonatal morbidity and mortality and has attracted research efforts from many scientific areas. The inter-relationship between uterine contraction and the underlying electrical activities makes uterine…

机器学习 · 计算机科学 2020-07-06 Jinshan Xu , Zhenqin Chen , Yanpei Lu , Xi Yang , Alain Pumir

The LLM-as-a-judge paradigm enables flexible, user-defined evaluation, but its effectiveness is often limited by the scarcity of diverse, representative data for refining criteria. We present a tool that integrates synthetic data generation…

The increasing reliance on Large Language Models (LLMs) across diverse sectors highlights the need for robust domain-specific and language-specific evaluation datasets; however, the collection of such datasets is challenging due to privacy…

人工智能 · 计算机科学 2026-04-28 Alessio Sordo , Lingxiao Du , Meeka-Hanna Lenisa , Evgeny Bogdanov , Maxim Romanovsky

Large language models (LLMs) show promise for extracting clinically meaningful information from unstructured health records, yet their translation into real-world settings is constrained by the lack of scalable and trustworthy validation…

Traditional benchmarking in NLP typically involves using static held-out test sets. However, this approach often results in an overestimation of performance and lacks the ability to offer comprehensive, interpretable, and dynamic…

计算与语言 · 计算机科学 2024-11-08 Raoyuan Zhao , Abdullatif Köksal , Yihong Liu , Leonie Weissweiler , Anna Korhonen , Hinrich Schütze

Multi-institutional electronic health record (Multi-EHR) data have emerged as a powerful resource for developing predictive models to support clinical decisions and for generating reliable real-world evidence. By aggregating information…

统计方法学 · 统计学 2026-05-12 Yuming Zhang , Congyuan Duan , Dong Xia , Doudou Zhou , Tianxi Cai

Fine-tuning large language models (LLMs) is essential for enhancing their performance on specific tasks but is often resource-intensive due to redundant or uninformative data. To address this inefficiency, we introduce DELIFT (Data…

计算与语言 · 计算机科学 2025-03-21 Ishika Agarwal , Krishnateja Killamsetty , Lucian Popa , Marina Danilevksy

The availability of large and deep electronic healthcare records (EHR) datasets has the potential to enable a better understanding of real-world patient journeys, and to identify novel subgroups of patients. ML-based aggregation of EHR data…

机器学习 · 计算机科学 2022-08-03 Owen Parsons , Nathan E Barlow , Janie Baxter , Karen Paraschin , Andrea Derix , Peter Hein , Robert Dürichen

Motivation: Electronic health record (EHR) data provides a new venue to elucidate disease comorbidities and latent phenotypes for precision medicine. To fully exploit its potential, a realistic data generative process of the EHR data needs…

As Large Language Models (LLMs) are pre-trained on ultra-large-scale corpora, the problem of data contamination is becoming increasingly serious, and there is a risk that static evaluation benchmarks overestimate the performance of LLMs. To…

计算与语言 · 计算机科学 2025-08-13 Yang Fan

Event Argument Extraction (EAE) is pivotal for extracting structured information from unstructured text, yet it remains challenging due to the complexity of real-world document-level EAE. We propose a novel Definition-augmented…

计算与语言 · 计算机科学 2024-09-04 Tongyue Sun , Jiayi Xiao

Electronic Health Records (EHRs) provide crucial information for clinical decision-making. However, their high-dimensionality, heterogeneity, and sparsity make clinical prediction challenging. Large Language Models (LLMs) allowed progress…

计算与语言 · 计算机科学 2026-01-28 Jesus Lovon-Melgarejo , Jose G. Moreno , Christine Damase-Michel , Lynda Tamine

Macro-aligned micro-records are crucial for credible simulations in social science and urban studies. For example, epidemic models are only reliable when individual-level mobility and contacts mirror real behavior, while aggregates match…

机器学习 · 计算机科学 2025-10-14 Yihong Tang , Menglin Kong , Junlin He , Tong Nie , Lijun Sun

Tracking how data is mentioned and used in research papers provides critical insights for improving data discoverability, quality, and production. However, manually identifying and classifying dataset mentions across vast academic…

计算与语言 · 计算机科学 2025-02-17 Aivin V. Solatorio , Rafael Macalaba , James Liounis

Code datasets, often collected from diverse and uncontrolled sources such as GitHub, potentially suffer from quality issues, thereby affecting the performance and training efficiency of Large Language Models (LLMs) optimized for code…

The quality of Supervised Fine-Tuning (SFT) data plays a critical role in enhancing the conversational capabilities of Large Language Models (LLMs). However, as LLMs become more advanced, the availability of high-quality human-annotated SFT…

计算与语言 · 计算机科学 2025-01-22 Maosong Cao , Taolin Zhang , Mo Li , Chuyu Zhang , Yunxin Liu , Haodong Duan , Songyang Zhang , Kai Chen

The use of Electronic Health Records (EHRs) has increased dramatically in the past 15 years, as, it is considered an important source of managing data od patients. The EHRs are primary sources of disease diagnosis and demographic data of…

机器学习 · 计算机科学 2024-04-02 Bushra F. Alsaqer , Alaa F. Alsaqer , Amna Asif