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Exploiting natural language processing in the clinical domain requires de-identification, i.e., anonymization of personal information in texts. However, current research considers de-identification and downstream tasks, such as concept…

计算与语言 · 计算机科学 2020-05-20 Lukas Lange , Heike Adel , Jannik Strötgen

Use of medical data, also known as electronic health records, in research helps develop and advance medical science. However, protecting patient confidentiality and identity while using medical data for analysis is crucial. Medical data can…

人工智能 · 计算机科学 2018-10-17 Vithya Yogarajan , Michael Mayo , Bernhard Pfahringer

Since clinical letters contain sensitive information, clinical-related datasets can not be widely applied in model training, medical research, and teaching. This work aims to generate reliable, various, and de-identified synthetic clinical…

计算与语言 · 计算机科学 2024-09-17 Libo Ren , Samuel Belkadi , Lifeng Han , Warren Del-Pinto , Goran Nenadic

Pre-trained Large Language Models (LLMs) often struggle on out-of-domain datasets like healthcare focused text. We explore specialized pre-training to adapt smaller LLMs to different healthcare datasets. Three methods are assessed:…

计算与语言 · 计算机科学 2024-04-01 Niall Taylor , Dan Schofield , Andrey Kormilitzin , Dan W Joyce , Alejo Nevado-Holgado

Biomedical text tagging systems are plagued by the dearth of labeled training data. There have been recent attempts at using pre-trained encoders to deal with this issue. Pre-trained encoder provides representation of the input text which…

计算与语言 · 计算机科学 2020-01-16 Gaurav Singh , Zahra Sabet , John Shawe-Taylor , James Thomas

Positron Emission Tomography (PET) imaging is a vital tool in medical diagnostics, offering detailed insights into molecular processes within the human body. However, PET images often suffer from complicated noise, which can obscure…

计算机视觉与模式识别 · 计算机科学 2026-01-30 Xuehua Ye , Hongxu Yang , Adam J. Schwarz

Unstructured information in electronic health records provide an invaluable resource for medical research. To protect the confidentiality of patients and to conform to privacy regulations, de-identification methods automatically remove…

计算与语言 · 计算机科学 2020-01-17 Jan Trienes , Dolf Trieschnigg , Christin Seifert , Djoerd Hiemstra

In this paper, we investigate self-supervised pre-training methods for document text recognition. Nowadays, large unlabeled datasets can be collected for many research tasks, including text recognition, but it is costly to annotate them.…

计算机视觉与模式识别 · 计算机科学 2024-05-02 Martin Kišš , Michal Hradiš

Improving the accuracy and reliability of medical coding reduces clinician burnout and supports revenue cycle processes, freeing providers to focus more on patient care. However, automating the assignment of ICD-10-CM and CPT codes from…

Deep neural networks are gaining increasing popularity for the classic text classification task, due to their strong expressive power and less requirement for feature engineering. Despite such attractiveness, neural text classification…

信息检索 · 计算机科学 2018-09-13 Yu Meng , Jiaming Shen , Chao Zhang , Jiawei Han

The increasing complexity of algorithms for analyzing medical data, including de-identification tasks, raises the possibility that complex algorithms are learning not just the general representation of the problem, but specifics of given…

机器学习 · 计算机科学 2021-05-24 Salman Seyedi , Li Xiong , Shamim Nemati , Gari D. Clifford

Case-based explanations are an intuitive method to gain insight into the decision-making process of deep learning models in clinical contexts. However, medical images cannot be shared as explanations due to privacy concerns. To address this…

计算机视觉与模式识别 · 计算机科学 2023-11-09 Helena Montenegro , Jaime S. Cardoso

Assisted text input techniques can save time and effort and improve text quality. In this paper, we investigate how grounded and conditional extensions to standard neural language models can bring improvements in the tasks of word…

计算与语言 · 计算机科学 2016-10-21 Georgios P. Spithourakis , Steffen E. Petersen , Sebastian Riedel

While large-scale pre-trained text-to-image models can synthesize diverse and high-quality human-centric images, an intractable problem is how to preserve the face identity for conditioned face images. Existing methods either require…

计算机视觉与模式识别 · 计算机科学 2023-07-04 Zhuowei Chen , Shancheng Fang , Wei Liu , Qian He , Mengqi Huang , Yongdong Zhang , Zhendong Mao

Automatic Speech Understanding (ASU) leverages the power of deep learning models for accurate interpretation of human speech, leading to a wide range of speech applications that enrich the human experience. However, training a robust ASU…

声音 · 计算机科学 2023-06-14 Tiantian Feng , Digbalay Bose , Xuan Shi , Shrikanth Narayanan

This work investigates the effectiveness of different pseudonymization techniques, ranging from rule-based substitutions to using pre-trained Large Language Models (LLMs), on a variety of datasets and models used for two widely used NLP…

计算与语言 · 计算机科学 2023-06-12 Oleksandr Yermilov , Vipul Raheja , Artem Chernodub

Large-scale clinical data is invaluable to driving many computational scientific advances today. However, understandable concerns regarding patient privacy hinder the open dissemination of such data and give rise to suboptimal siloed…

计算与语言 · 计算机科学 2019-05-23 Oren Melamud , Chaitanya Shivade

Large language models are shown to memorize privacy information such as social security numbers in training data. Given the sheer scale of the training corpus, it is challenging to screen and filter these privacy data, either manually or…

计算与语言 · 计算机科学 2022-06-27 Xuandong Zhao , Lei Li , Yu-Xiang Wang

Clinical language models are important for many applications in healthcare, but their development depends on access to extensive clinical text for pretraining. However, obtaining clinical notes from electronic health records (EHRs) at scale…

计算与语言 · 计算机科学 2024-12-02 Jinghui Liu , Anthony Nguyen

Protecting patient privacy in clinical narratives is essential for enabling secondary use of healthcare data under regulations such as GDPR and HIPAA. While manual de-identification remains the gold standard, it is costly and slow,…

密码学与安全 · 计算机科学 2026-04-24 Michele Miranda , Xinlan Yan , Nishant Mishra , Rachel Murphy , Ameen Abu-Hanna , Sébastien Bratières , Iacer Calixto