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Entity Resolution (ER) is the problem of semi-automatically determining when two entities refer to the same underlying entity, with applications ranging from healthcare to e-commerce. Traditional ER solutions required considerable manual…

人工智能 · 计算机科学 2024-04-09 Navapat Nananukul , Khanin Sisaengsuwanchai , Mayank Kejriwal

Identifying medication discontinuations in electronic health records (EHRs) is vital for patient safety but is often hindered by information being buried in unstructured notes. This study aims to evaluate the capabilities of advanced…

计算与语言 · 计算机科学 2025-11-10 Chong Shao , Douglas Snyder , Chiran Li , Bowen Gu , Kerry Ngan , Chun-Ting Yang , Jiageng Wu , Richard Wyss , Kueiyu Joshua Lin , Jie Yang

This work presents our participation in the EvalLLM 2025 challenge on biomedical Named Entity Recognition (NER) and health event extraction in French (few-shot setting). For NER, we propose three approaches combining large language models…

Electronic health records (EHR) even though a boon for healthcare practitioners, are growing convoluted and longer every day. Sifting around these lengthy EHRs is taxing and becomes a cumbersome part of physician-patient interaction.…

计算与语言 · 计算机科学 2024-04-26 Saranya Krishnamoorthy , Ayush Singh , Shabnam Tafreshi

Named Entity Recognition (NER) in the rare disease domain poses unique challenges due to limited labeled data, semantic ambiguity between entity types, and long-tail distributions. In this study, we evaluate the capabilities of GPT-4o for…

计算与语言 · 计算机科学 2025-12-30 Nan Miles Xi , Yu Deng , Lin Wang

The inherent complexity of structured longitudinal Electronic Health Records (EHR) data poses a significant challenge when integrated with Large Language Models (LLMs), which are traditionally tailored for natural language processing.…

计算与语言 · 计算机科学 2024-02-13 Yinghao Zhu , Zixiang Wang , Junyi Gao , Yuning Tong , Jingkun An , Weibin Liao , Ewen M. Harrison , Liantao Ma , Chengwei Pan

Neural networks (NNs) have become the state of the art in many machine learning applications, especially in image and sound processing [1]. The same, although to a lesser extent [2,3], could be said in natural language processing (NLP)…

计算与语言 · 计算机科学 2019-07-30 Luka Gligic , Andrey Kormilitzin , Paul Goldberg , Alejo Nevado-Holgado

Named entity recognition (NER) is a fundamental task in numerous downstream applications. Recently, researchers have employed pre-trained language models (PLMs) and large language models (LLMs) to address this task. However, fully…

计算与语言 · 计算机科学 2025-10-30 Yufei Zhao , Xiaoshi Zhong , Erik Cambria , Jagath C. Rajapakse

Named Entity Recognition has traditionally been a key task in natural language processing, aiming to identify and extract important terms from unstructured text data. However, a notable challenge for contemporary deep-learning NER models…

计算与语言 · 计算机科学 2025-08-19 Tzu-Chieh Chen , Wen-Yang Lin

In the rapidly evolving field of healthcare and beyond, the integration of generative AI in Electronic Health Records (EHRs) represents a pivotal advancement, addressing a critical gap in current information extraction techniques. This…

计算与语言 · 计算机科学 2024-06-03 Mohammed-Khalil Ghali , Abdelrahman Farrag , Hajar Sakai , Hicham El Baz , Yu Jin , Sarah Lam

With the advent of artificial intelligence (AI), many researchers are attempting to extract structured information from document-level biomedical literature by fine-tuning large language models (LLMs). However, they face significant…

神经与进化计算 · 计算机科学 2026-02-26 Lei Zhao , Ling Kang , Quan Guo

This work investigates multiple approaches to Named Entity Recognition (NER) for text in Electronic Health Record (EHR) data. In particular, we look into the application of (i) rule-based, (ii) deep learning and (iii) transfer learning…

Biomedical named entity recognition (NER) is a high-utility natural language processing (NLP) task, and large language models (LLMs) show promise particularly in few-shot settings (i.e., limited training data). In this article, we address…

计算与语言 · 计算机科学 2025-08-12 Yao Ge , Sudeshna Das , Yuting Guo , Abeed Sarker

The extraction of critical patient information from Electronic Health Records (EHRs) poses significant challenges due to the complexity and unstructured nature of the data. Traditional machine learning approaches often fail to capture…

计算与语言 · 计算机科学 2025-09-03 Zhimeng Luo , Abhibha Gupta , Adam Frisch , Daqing He

Extracting clinically relevant information from unstructured medical narratives such as admission notes, discharge summaries, and emergency case histories remains a challenge in clinical natural language processing (NLP). Medical Entity…

Electronic health records (EHRs) contain vast amounts of complex data, but harmonizing and processing this information remains a challenging and costly task requiring significant clinical expertise. While large language models (LLMs) have…

计算与语言 · 计算机科学 2024-07-02 João Matos , Jack Gallifant , Jian Pei , A. Ian Wong

Unstructured data in Electronic Health Records (EHRs) often contains critical information -- complementary to imaging -- that could inform radiologists' diagnoses. But the large volume of notes often associated with patients together with…

计算与语言 · 计算机科学 2024-06-12 Hiba Ahsan , Denis Jered McInerney , Jisoo Kim , Christopher Potter , Geoffrey Young , Silvio Amir , Byron C. Wallace

Objective: This study quantifies the capabilities of GPT-3.5 and GPT-4 for clinical named entity recognition (NER) tasks and proposes task-specific prompts to improve their performance. Materials and Methods: We evaluated these models on…

Electronic Health Records (EHRs) have become the primary form of medical data-keeping across the United States. Federal law restricts the sharing of any EHR data that contains protected health information (PHI). De-identification, the…

计算与语言 · 计算机科学 2021-03-26 Abdullah Ahmed , Adeel Abbasi , Carsten Eickhoff

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

计算与语言 · 计算机科学 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao
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