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Multimodal deep learning (MDL) has emerged as a transformative approach in computational pathology. By integrating complementary information from multiple data sources, MDL models have demonstrated superior predictive performance across…

定量方法 · 定量生物学 2025-11-17 Seth Alain Chang , Muhammad Mueez Amjad , Noorul Wahab , Ethar Alzaid , Nasir Rajpoot , Adam Shephard

Current multimodal survival prediction methods typically rely on pathology images (WSIs) and genomic data, both of which are high-dimensional and redundant, making it difficult to extract discriminative features from them and align…

计算机视觉与模式识别 · 计算机科学 2025-12-17 Chenyu Zhao , Yingxue Xu , Fengtao Zhou , Yihui Wang , Hao Chen

This paper focuses on the task of survival time analysis for lung cancer. Although much progress has been made in this problem in recent years, the performance of existing methods is still far from satisfactory. Traditional and some deep…

计算机视觉与模式识别 · 计算机科学 2022-11-08 Yujiao Wu , Yaxiong Wang , Xiaoshui Huang , Fan Yang , Sai Ho Ling , Steven Weidong Su

Predicting drug response in patients from preclinical data remains a major challenge in precision oncology due to the substantial biological gap between in vitro cell lines and patient tumors. Rather than aiming to improve absolute in vitro…

机器学习 · 计算机科学 2026-03-18 Camille Jimenez Cortes , Philippe Lalanda , German Vega

Deep learning methods are powerful tools in classifying multivariate time series data. Despite their high performance, these methods are hard to interpret, which diminishes their applications in high-risk domains such as healthcare. In this…

机器学习 · 计算机科学 2026-05-11 Bhavesh Kalisetti , Vincent Wang , Gaurav R. Ghosal , Maryam Bijanzadeh , Reza Abbasi-Asl

Whole slide images (WSIs) enable weakly supervised prognostic modeling via multiple instance learning (MIL). Spatial transcriptomics (ST) preserves in situ gene expression, providing a spatial molecular context that complements morphology.…

计算机视觉与模式识别 · 计算机科学 2026-02-16 Lihe Liu , Xiaoxi Pan , Yinyin Yuan , Lulu Shang

Survival prediction is crucial for cancer patients as it provides early prognostic information for treatment planning. Recently, deep survival models based on deep learning and medical images have shown promising performance for survival…

图像与视频处理 · 电气工程与系统科学 2023-10-03 Mingyuan Meng , Lei Bi , Michael Fulham , Dagan Feng , Jinman Kim

End-to-end optimization has achieved state-of-the-art performance on many specific problems, but there is no straight-forward way to combine pretrained models for new problems. Here, we explore improving modularity by learning a post-hoc…

机器学习 · 计算机科学 2019-02-25 Yingtao Tian , Jesse Engel

Multimodal learning aims to imitate human beings to acquire complementary information from multiple modalities for various downstream tasks. However, traditional aggregation-based multimodal fusion methods ignore the inter-modality…

计算机视觉与模式识别 · 计算机科学 2023-05-17 Heqing Zou , Meng Shen , Chen Chen , Yuchen Hu , Deepu Rajan , Eng Siong Chng

Cancer diagnosis, prognosis, and therapeutic response predictions are based on morphological information from histology slides and molecular profiles from genomic data. However, most deep learning-based objective outcome prediction and…

计算机视觉与模式识别 · 计算机科学 2020-09-04 Richard J. Chen , Ming Y. Lu , Jingwen Wang , Drew F. K. Williamson , Scott J. Rodig , Neal I. Lindeman , Faisal Mahmood

Pre-trained Vision-Language Models (VLMs) such as CLIP have shown excellent generalization abilities. However, adapting these large-scale models to downstream tasks while preserving their generalization capabilities remains challenging.…

计算机视觉与模式识别 · 计算机科学 2025-08-15 Hao Zheng , Shunzhi Yang , Zhuoxin He , Jinfeng Yang , Zhenhua Huang

Multimodal Federated Learning (MFL) with mixed modalities enables unimodal and multimodal clients to collaboratively train models while ensuring clients' privacy. As a representative sample of local data, prototypes offer an approach with…

机器学习 · 计算机科学 2025-08-05 Keke Gai , Mohan Wang , Jing Yu , Dongjue Wang , Qi Wu

Modern recommender systems face critical challenges in handling information overload while addressing the inherent limitations of multimodal representation learning. Existing methods suffer from three fundamental limitations: (1) restricted…

信息检索 · 计算机科学 2025-08-15 Zheyu Chen , Jinfeng Xu , Hewei Wang , Shuo Yang , Zitong Wan , Haibo Hu

Multimodal pathological images are usually in clinical diagnosis, but computer vision-based multimodal image-assisted diagnosis faces challenges with modality fusion, especially in the absence of expert-annotated data. To achieve the…

计算机视觉与模式识别 · 计算机科学 2025-09-24 Qinghua Lin , Guang-Hai Liu , Zuoyong Li , Yang Li , Yuting Jiang , Xiang Wu

Multi-modal pre-training and knowledge discovery are two important research topics in multi-modal machine learning. Nevertheless, none of existing works make attempts to link knowledge discovery with knowledge guided multi-modal…

计算与语言 · 计算机科学 2022-06-14 Zhihao Fan , Zhongyu Wei , Jingjing Chen , Siyuan Wang , Zejun Li , Jiarong Xu , Xuanjing Huang

Histopathology remains the gold standard for cancer diagnosis and prognosis. With the advent of transcriptome profiling, multi-modal learning combining transcriptomics with histology offers more comprehensive information. However, existing…

图像与视频处理 · 电气工程与系统科学 2026-03-03 Yupei Zhang , Xiaofei Wang , Anran Liu , Lequan Yu , Chao Li

Multimodal learning seeks to utilize data from multiple sources to improve the overall performance of downstream tasks. It is desirable for redundancies in the data to make multimodal systems robust to missing or corrupted observations in…

计算机视觉与模式识别 · 计算机科学 2024-10-14 Md Kaykobad Reza , Ashley Prater-Bennette , M. Salman Asif

Simultaneously using multimodal inputs from multiple sensors to train segmentors is intuitively advantageous but practically challenging. A key challenge is unimodal bias, where multimodal segmentors over rely on certain modalities, causing…

计算机视觉与模式识别 · 计算机科学 2025-05-19 Xu Zheng , Haiwei Xue , Jialei Chen , Yibo Yan , Lutao Jiang , Yuanhuiyi Lyu , Kailun Yang , Linfeng Zhang , Xuming Hu

In time-series domains where both predictive performance and interpretability are essential, deep neural networks achieve strong results but provide limited insight into how their predictions are made. Projection-based prototype networks…

机器学习 · 计算机科学 2026-05-11 Steven Song , Sahil Sethi , Brett Beaulieu-Jones , Robert L. Grossman

Survival analysis using pathology images poses a considerable challenge, as it requires the localization of relevant information from the multitude of tiles within whole slide images (WSIs). Current methods typically resort to a two-stage…

图像与视频处理 · 电气工程与系统科学 2024-09-09 Zhongwei Qiu , Hanqing Chao , Wenbin Liu , Yixuan Shen , Le Lu , Ke Yan , Dakai Jin , Yun Bian , Hui Jiang