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Assessing drug-target affinity is a critical step in the drug discovery and development process, but to obtain such data experimentally is both time consuming and expensive. For this reason, computational methods for predicting binding…

机器学习 · 计算机科学 2022-09-15 Elizaveta Vinogradova , Karina Pats , Ferdinand Molnár , Siamac Fazli

Surgical triplet recognition is an essential building block to enable next-generation context-aware operating rooms. The goal is to identify the combinations of instruments, verbs, and targets presented in surgical video frames. In this…

计算机视觉与模式识别 · 计算机科学 2024-06-25 Daochang Liu , Axel Hu , Mubarak Shah , Chang Xu

Local causal structure learning aims to discover and distinguish direct causes (parents) and direct effects (children) of a variable of interest from data. While emerging successes have been made, existing methods need to search a large…

机器学习 · 计算机科学 2021-03-02 Shuai Yang , Hao Wang , Kui Yu , Fuyuan Cao , Xindong Wu

Drug-drug interaction prediction is a crucial issue in molecular biology. Traditional methods of observing drug-drug interactions through medical experiments require significant resources and labor. This paper presents a medical knowledge…

计算与语言 · 计算机科学 2024-07-29 Peng Gao , Feng Gao , Jian-Cheng Ni , Yu Wang , Fei Wang

Drug combinations can cause adverse drug-drug interactions(DDIs). Identifying specific effects is crucial for developing safer therapies. Previous works on DDI event prediction have typically been limited to using labels of specific events…

生物大分子 · 定量生物学 2024-11-05 Yingying Wang , Yun Xiong , Xixi Wu , Xiangguo Sun , Jiawei Zhang

Growing evidence from recent studies implies that microRNA or miRNA could serve as biomarkers in various complex human diseases. Since wet-lab experiments are expensive and time-consuming, computational techniques for miRNA-disease…

定量方法 · 定量生物学 2021-11-30 Thi Ngan Dong , Megha Khosla

Neural metrics have achieved impressive correlation with human judgements in the evaluation of machine translation systems, but before we can safely optimise towards such metrics, we should be aware of (and ideally eliminate) biases toward…

计算与语言 · 计算机科学 2022-09-27 Chantal Amrhein , Rico Sennrich

The timeline of computer vision research is marked with advances in learning and utilizing efficient contextual representations. Most of them, however, are targeted at improving model performance on a single downstream task. We consider a…

计算机视觉与模式识别 · 计算机科学 2021-08-24 David Bruggemann , Menelaos Kanakis , Anton Obukhov , Stamatios Georgoulis , Luc Van Gool

This paper proposes a novel approach to generate samples from target distributions that are difficult to sample from using Markov Chain Monte Carlo (MCMC) methods. Traditional MCMC algorithms often face slow convergence due to the…

宇宙学与河外天体物理 · 物理学 2023-08-11 Sandro Dias Pinto Vitenti , Eduardo J. Barroso

The sparse Mixture-of-Experts (Sparse-MoE) framework efficiently scales up model capacity in various domains, such as natural language processing and vision. Sparse-MoEs select a subset of the "experts" (thus, only a portion of the overall…

机器学习 · 计算机科学 2023-06-06 Shibal Ibrahim , Wenyu Chen , Hussein Hazimeh , Natalia Ponomareva , Zhe Zhao , Rahul Mazumder

Contrastive learning is emerging as a powerful technique for extracting knowledge from unlabeled data. This technique requires a balanced mixture of two ingredients: positive (similar) and negative (dissimilar) samples. This is typically…

计算与语言 · 计算机科学 2022-03-17 Rui Cao , Yihao Wang , Yuxin Liang , Ling Gao , Jie Zheng , Jie Ren , Zheng Wang

MiRNAs, due to their role in gene regulation, have paved a new pathway for pharmacology, focusing on drug development that targets miRNAs. However, traditional wet lab experiments are limited by efficiency and cost constraints, making it…

机器学习 · 计算机科学 2025-12-08 Ziqi Zhang

Volumetric medical segmentation is a critical component of 3D medical image analysis that delineates different semantic regions. Deep neural networks have significantly improved volumetric medical segmentation, but they generally require…

图像与视频处理 · 电气工程与系统科学 2024-07-18 Hanan Gani , Muzammal Naseer , Fahad Khan , Salman Khan

Low-shot relation extraction~(RE) aims to recognize novel relations with very few or even no samples, which is critical in real scenario application. Few-shot and zero-shot RE are two representative low-shot RE tasks, which seem to be with…

计算与语言 · 计算机科学 2022-03-24 Fangchao Liu , Hongyu Lin , Xianpei Han , Boxi Cao , Le Sun

Drug similarity has been studied to support downstream clinical tasks such as inferring novel properties of drugs (e.g. side effects, indications, interactions) from known properties. The growing availability of new types of drug features…

机器学习 · 计算机科学 2018-05-01 Tengfei Ma , Cao Xiao , Jiayu Zhou , Fei Wang

Extracting drug use information from unstructured Electronic Health Records remains a major challenge in clinical Natural Language Processing. While Large Language Models demonstrate advancements, their use in clinical NLP is limited by…

计算与语言 · 计算机科学 2026-02-11 Huu-Huy-Hoang Tran , Gia-Bao Duong , Quoc-Viet-Anh Tran , Thi-Hai-Yen Vuong , Hoang-Quynh Le

Multi-objective combinatorial optimization (MOCO) problems are prevalent in various real-world applications. Most existing neural MOCO methods rely on problem decomposition to transform an MOCO problem into a series of singe-objective…

机器学习 · 计算机科学 2025-01-28 Yongfan Lu , Zixiang Di , Bingdong Li , Shengcai Liu , Hong Qian , Peng Yang , Ke Tang , Aimin Zhou

Local causal structure learning aims to discover and distinguish direct causes (parents) and direct effects (children) of a variable of interest from data. While emerging successes have been made, existing methods need to search a large…

人工智能 · 计算机科学 2021-01-12 Shuai Yang , Hao Wang , Kui Yu , Fuyuan Cao , Xindong Wu

Text toxicity detection systems exhibit significant biases, producing disproportionate rates of false positives on samples mentioning demographic groups. But what about toxicity detection in speech? To investigate the extent to which…

Surgical action triplet recognition aims to understand fine-grained surgical behaviors by modeling the interactions among instruments, actions, and anatomical targets. Despite its clinical importance for workflow analysis and skill…

计算机视觉与模式识别 · 计算机科学 2026-01-21 Yongjun Jeon , Jongmin Shin , Kanggil Park , Seonmin Park , Soyoung Lim , Jung Yong Kim , Jinsoo Rhu , Jongman Kim , Gyu-Seong Choi , Namkee Oh , Kyu-Hwan Jung