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Graph Transformers (GTs) have demonstrated their advantages across a wide range of tasks. However, the self-attention mechanism in GTs overlooks the graph's inductive biases, particularly biases related to structure, which are crucial for…

机器学习 · 计算机科学 2024-04-25 Chuang Liu , Zelin Yao , Yibing Zhan , Xueqi Ma , Shirui Pan , Wenbin Hu

Predicting the response of a cancer cell line to a therapeutic drug is pivotal for personalized medicine. Despite numerous deep learning methods that have been developed for drug response prediction, integrating diverse information about…

机器学习 · 计算机科学 2025-03-31 Haoyuan Shi , Tao Xu , Xiaodi Li , Qian Gao , Zhiwei Xiong , Junfeng Xia , Zhenyu Yue

In this work, we present RadioTransformer, a novel visual attention-driven transformer framework, that leverages radiologists' gaze patterns and models their visuo-cognitive behavior for disease diagnosis on chest radiographs. Domain…

计算机视觉与模式识别 · 计算机科学 2022-07-25 Moinak Bhattacharya , Shubham Jain , Prateek Prasanna

We introduce the Momentum Transformer, an attention-based deep-learning architecture, which outperforms benchmark time-series momentum and mean-reversion trading strategies. Unlike state-of-the-art Long Short-Term Memory (LSTM)…

机器学习 · 计算机科学 2022-11-24 Kieran Wood , Sven Giegerich , Stephen Roberts , Stefan Zohren

Accurate prediction of molecular properties is essential in drug discovery and related fields. However, existing graph neural networks (GNNs) often struggle to simultaneously capture both local and global molecular structures. In this work,…

机器学习 · 计算机科学 2025-08-26 XiaYu Liu , Chao Fan , Yang Liu , Hou-biao Li

The self-attention mechanism has been a key factor in the advancement of vision Transformers. However, its quadratic complexity imposes a heavy computational burden in high-resolution scenarios, restricting the practical application.…

计算机视觉与模式识别 · 计算机科学 2025-12-29 Dongchen Han , Tianyu Li , Ziyi Wang , Gao Huang

We introduce deep learning technique to predict the beam propagation factor M^2 of the laser beams emitting from few-mode fiber for the first time, to the best of our knowledge. The deep convolutional neural network (CNN) is trained with…

图像与视频处理 · 电气工程与系统科学 2019-07-16 Yi An , Jun Li , Liangjin Huang , Jinyong Leng , Lijia Yang , Pu Zhou

Graph Transformers (GTs) show considerable potential in graph representation learning. The architecture of GTs typically integrates Graph Neural Networks (GNNs) with global attention mechanisms either in parallel or as a precursor to…

机器学习 · 计算机科学 2026-02-04 Gang Wu , Zhengwei Wang

Transformer-based deep learning models have achieved state-of-the-art performance across numerous language and vision tasks. While the self-attention mechanism, a core component of transformers, has proven capable of handling complex data…

机器学习 · 计算机科学 2025-08-05 Laziz Abdullaev , Tan M. Nguyen

Accurate identification of drug-target interactions (DTI) remains a central challenge in computational pharmacology, where sequence-based methods offer scalability. This work introduces a sequence-based drug-target interaction framework…

The prediction modeling of drug-target interactions is crucial to drug discovery and design, which has seen rapid advancements owing to deep learning technologies. Recently developed methods, such as those based on graph neural networks…

定量方法 · 定量生物学 2025-11-19 Xinnan Zhang , Jialin Wu , Junyi Xie , Tianlong Chen , Kaixiong Zhou

Attention-based beamformers have recently been shown to be effective for multi-channel speech recognition. However, they are less capable at capturing local information. In this work, we propose a 2D Conv-Attention module which combines…

音频与语音处理 · 电气工程与系统科学 2021-05-18 Bhargav Pulugundla , Yang Gao , Brian King , Gokce Keskin , Harish Mallidi , Minhua Wu , Jasha Droppo , Roland Maas

Trajectory prediction is fundamental to various intelligent technologies, such as autonomous driving and robotics. The motion prediction of pedestrians and vehicles helps emergency braking, reduces collisions, and improves traffic safety.…

计算机视觉与模式识别 · 计算机科学 2024-05-14 Yao Liu , Binghao Li , Xianzhi Wang , Claude Sammut , Lina Yao

Recently, large efforts have been made to design efficient linear-complexity visual Transformers. However, current linear attention models are generally unsuitable to be deployed in resource-constrained mobile devices, due to suffering from…

计算机视觉与模式识别 · 计算机科学 2026-01-27 Yuan Zhou , Qingshan Xu , Jiequan Cui , Junbao Zhou , Jing Zhang , Richang Hong , Hanwang Zhang

With the rapid advancement of deep learning, attention mechanisms have become indispensable in electroencephalography (EEG) signal analysis, significantly enhancing Brain-Computer Interface (BCI) applications. This paper presents a…

信号处理 · 电气工程与系统科学 2025-07-08 Jiyuan Wang , Weishan Ye , Jialin He , Li Zhang , Gan Huang , Zhuliang Yu , Zhen Liang

The real-time crash likelihood prediction model is an essential component of the proactive traffic safety management system. Over the years, numerous studies have attempted to construct a crash likelihood prediction model in order to…

机器学习 · 计算机科学 2023-08-30 B M Tazbiul Hassan Anik , Zubayer Islam , Mohamed Abdel-Aty

Currently, convolutional neural networks (CNN) (e.g., U-Net) have become the de facto standard and attained immense success in medical image segmentation. However, as a downside, CNN based methods are a double-edged sword as they fail to…

图像与视频处理 · 电气工程与系统科学 2022-04-01 Reza Azad , Moein Heidari , Yuli Wu , Dorit Merhof

The prediction of protein interactions (CPIs) is crucial for the in-silico screening step in drug discovery. Recently, many end-to-end representation learning methods using deep neural networks have achieved significantly better performance…

定量方法 · 定量生物学 2020-11-30 Jingtao Wang , Xi Li , Hua Zhang

This study presents a novel deep learning method, called GATv2-GCN, for predicting player performance in sports. To construct a dynamic player interaction graph, we leverage player statistics and their interactions during gameplay. We use a…

机器学习 · 计算机科学 2023-03-30 Rui Luo , Vikram Krishnamurthy

Molecular property prediction with deep learning has gained much attention over the past years. Owing to the scarcity of labeled molecules, there has been growing interest in self-supervised learning methods that learn generalizable…

机器学习 · 计算机科学 2023-09-04 Peizhen Bai , Xianyuan Liu , Haiping Lu