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Large scale-free graphs are famously difficult to process efficiently: the skewed vertex degree distribution makes it difficult to obtain balanced partitioning. Our research instead aims to turn this into an advantage by partitioning the…

分布式、并行与集群计算 · 计算机科学 2015-10-05 Scott Sallinen , Abdullah Gharaibeh , Matei Ripeanu

Computational Pangenomics is an emerging field that studies genetic variation using a graph structure encompassing multiple genomes. Visualizing pangenome graphs is vital for understanding genome diversity. Yet, handling large graphs can be…

分布式、并行与集群计算 · 计算机科学 2026-05-29 Jiajie Li , Jan-Niklas Schmelzle , Yixiao Du , Simon Heumos , Andrea Guarracino , Giulia Guidi , Pjotr Prins , Erik Garrison , Zhiru Zhang

In order to check the compatibility of the gluon Reggeization in QCD with the $s$-channel unitarity, the one-loop correction to the Reggeon-Reggeon-gluon vertex must be known at arbitrary space-time dimension $D$. We obtain this correction…

高能物理 - 唯象学 · 物理学 2009-10-31 V. S. Fadin , R. Fiore , A. Papa

This paper presents a portable, GPU-accelerated implementation of a QR-based singular value computation algorithm in Julia. The singular value ecomposition (SVD) is a fundamental numerical tool in scientific computing and machine learning,…

分布式、并行与集群计算 · 计算机科学 2025-08-11 Evelyne Ringoot , Rabab Alomairy , Valentin Churavy , Alan Edelman

We design, implement, and evaluate GPU-based algorithms for the maximum cardinality matching problem in bipartite graphs. Such algorithms have a variety of applications in computer science, scientific computing, bioinformatics, and other…

分布式、并行与集群计算 · 计算机科学 2013-03-07 Mehmet Deveci , Kamer Kaya , Bora Ucar , Umit V. Catalyurek

The self-join finds all objects in a dataset that are within a search distance, epsilon, of each other; therefore, the self-join is a building block of many algorithms. We advance a GPU-accelerated self-join algorithm targeted towards high…

分布式、并行与集群计算 · 计算机科学 2018-09-27 Michael Gowanlock , Ben Karsin

The ability to calculate analytic full-colour two-to-three two-loop helicity amplitudes in massless QCD has been a recent triumph of the field, driving phenomenology towards one percent precision. In this contribution, we focus on the…

高能物理 - 唯象学 · 物理学 2023-10-31 Ryan Moodie

This paper presents, to the author's knowledge, the first graphics processing unit (GPU) accelerated program that solves the evolution of interacting scalar fields in an expanding universe. We present the implementation in NVIDIA's Compute…

天体物理仪器与方法 · 物理学 2014-11-20 Jani Sainio

Although QUDA allows for an efficient computation of many QCD quantities, it is surprinsingly lacking tools to evaluate disconnected diagrams, for which GPUs are specially well suited. We aim to fill this gap by creating our own branch of…

As part of the Exascale Computing Project (ECP), a recent focus of development efforts for the SUite of Nonlinear and DIfferential/ALgebraic equation Solvers (SUNDIALS) has been to enable GPU-accelerated time integration in scientific…

分布式、并行与集群计算 · 计算机科学 2023-01-04 Cody J. Balos , David J. Gardner , Carol S. Woodward , Daniel R. Reynolds

The rapid growth in genomic pathogen data spurs the need for efficient inference techniques, such as Hamiltonian Monte Carlo (HMC) in a Bayesian framework, to estimate parameters of these phylogenetic models where the dimensions of the…

Maximal Biclique Enumeration (MBE) holds critical importance in graph theory with applications extending across fields such as bioinformatics, social networks, and recommendation systems. However, its computational complexity presents…

分布式、并行与集群计算 · 计算机科学 2025-05-23 Chou-Ying Hsieh , Chia-Ming Chang , Po-Hsiu Cheng , Sy-Yen Kuo

This paper presents a spectral element finite element scheme that efficiently solves elliptic problems on unstructured hexahedral meshes. The discrete equations are solved using a matrix-free preconditioned conjugate gradient algorithm. An…

计算工程、金融与科学 · 计算机科学 2016-09-21 J. -F. Remacle , R. Gandham , T. Warburton

We use on-shell recursion relations to compute analytically the one-loop corrections to maximally-helicity-violating n-gluon amplitudes in QCD. The cut-containing parts have been computed previously; our work supplies the remaining rational…

高能物理 - 唯象学 · 物理学 2008-11-26 Carola F. Berger , Zvi Bern , Lance J. Dixon , Darren Forde , David A. Kosower

This dissertation presents the design, implementation and evaluation of GPU-accelerated simulation frameworks for Evolutionary Spatial Cyclic Games (ESCGs), a class of agent-based models used to study ecological and evolutionary dynamics.…

分布式、并行与集群计算 · 计算机科学 2025-08-26 Louie Sinadjan

We have developed a numerical framework for a full solution of the relativistic Boltzmann equations for the quark-gluon matter using the multiple Graphics Processing Units (GPUs) on distributed clusters. Including all the $2 \to 2$…

高能物理 - 唯象学 · 物理学 2020-10-28 Jun-Jie Zhang , Hong-Zhong Wu , Shi Pu , Guang-You Qin , Qun Wang

PyRadiomics-cuda is a GPU-accelerated extension of the PyRadiomics library, designed to address the computational challenges of extracting three-dimensional shape features from medical images. By offloading key geometric computations to GPU…

分布式、并行与集群计算 · 计算机科学 2026-02-20 Jakub Lisowski , Piotr Tyrakowski , Szymon Zyguła , Krzysztof Kaczmarski

The alternating direction method of multipliers (ADMM) is a powerful operator splitting technique for solving structured convex optimization problems. Due to its relatively low per-iteration computational cost and ability to exploit…

最优化与控制 · 数学 2020-06-09 Michel Schubiger , Goran Banjac , John Lygeros

Graphics Processing Unit, or GPUs, have been successfully adopted both for graphic computation in 3D applications, and for general purpose application (GP-GPUs), thank to their tremendous performance-per-watt. Recently, there is a big…

分布式、并行与集群计算 · 计算机科学 2023-10-03 Paolo Burgio

Fast 4$\pi$ solid angle particle track recognition has been a challenge in particle physics for a long time, especially in using nuclear emulsion detectors. The recent advances in computing technology opened the way for its realization. A…

仪器与探测器 · 物理学 2015-06-18 A. Ariga , T. Ariga