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Graph Neural Networks are powerful models for learning from graph-structured data, yet their effectiveness is often limited by two critical challenges: over-squashing, where information from distant nodes is excessively compressed, and…

机器学习 · 计算机科学 2026-05-04 Hugo Attali , Davide Buscaldi , Nathalie Pernelle , Fragkiskos D. Malliaros

Graph neural network (GNN) has shown convincing performance in learning powerful node representations that preserve both node attributes and graph structural information. However, many GNNs encounter problems in effectiveness and efficiency…

机器学习 · 计算机科学 2022-01-03 Jiyang Bai , Yuxiang Ren , Jiawei Zhang

Message Passing Neural Networks (MPNNs) hold a key position in machine learning on graphs, but they struggle with unintended behaviors, such as over-smoothing and over-squashing, due to irregular data structures. The observation and…

机器学习 · 计算机科学 2025-08-26 Junhyun Lee , Veronika Thost , Bumsoo Kim , Jaewoo Kang , Tengfei Ma

Deep Graph Neural Networks struggle with oversmoothing. This paper introduces a novel, physics-inspired GNN model designed to mitigate this issue. Our approach integrates with existing GNN architectures, introducing an entropy-aware message…

机器学习 · 计算机科学 2024-03-08 Philipp Nazari , Oliver Lemke , Davide Guidobene , Artiom Gesp

Graph Nerual Networks (GNNs) are effective models in graph embedding. It extracts shallow features and neighborhood information by aggregating neighbor information to learn the embedding representation of different nodes. However, the local…

社会与信息网络 · 计算机科学 2023-12-14 Kejia Zhang

Residual connections and normalization layers have become standard design choices for graph neural networks (GNNs), and were proposed as solutions to the mitigate the oversmoothing problem in GNNs. However, how exactly these methods help…

机器学习 · 计算机科学 2026-01-21 Michael Scholkemper , Xinyi Wu , Ali Jadbabaie , Michael T. Schaub

In recent years, hypergraph learning has attracted great attention due to its capacity in representing complex and high-order relationships. However, current neural network approaches designed for hypergraphs are mostly shallow, thus…

机器学习 · 计算机科学 2022-11-03 Guanzi Chen , Jiying Zhang , Xi Xiao , Yang Li

The relationship between Layer Normalization (LN) placement and the oversmoothing phenomenon remains underexplored. We identify a critical dilemma: Pre-LN architectures avoid oversmoothing but suffer from the curse of depth, while Post-LN…

机器学习 · 计算机科学 2025-12-11 Weiqi Guan , Junlin He

Oversmoothing is a common phenomenon in a wide range of Graph Neural Networks (GNNs) and Transformers, where performance worsens as the number of layers increases. Instead of characterizing oversmoothing from the view of complete collapse…

机器学习 · 计算机科学 2023-05-03 Xiaojun Guo , Yifei Wang , Tianqi Du , Yisen Wang

Graph convolutional neural networks (GCNNs) have received much attention recently, owing to their capability in handling graph-structured data. Among the existing GCNNs, many methods can be viewed as instances of a neural message passing…

机器学习 · 计算机科学 2021-03-19 Tien Huu Do , Duc Minh Nguyen , Giannis Bekoulis , Adrian Munteanu , Nikos Deligiannis

Despite much research, Graph Neural Networks (GNNs) still do not display the favorable scaling properties of other deep neural networks such as Convolutional Neural Networks and Transformers. Previous work has identified issues such as…

机器学习 · 计算机科学 2023-12-19 Ameen Ali , Hakan Cevikalp , Lior Wolf

Graph Attention Networks (GATs) are the state-of-the-art neural architecture for representation learning with graphs. GATs learn attention functions that assign weights to nodes so that different nodes have different influences in the…

机器学习 · 计算机科学 2019-10-29 Guangtao Wang , Rex Ying , Jing Huang , Jure Leskovec

Most graph neural networks follow the message passing mechanism. However, it faces the over-smoothing problem when multiple times of message passing is applied to a graph, causing indistinguishable node representations and prevents the…

机器学习 · 计算机科学 2023-02-06 Yunchong Song , Chenghu Zhou , Xinbing Wang , Zhouhan Lin

Graph neural networks (GNNs) are one of the most popular research topics for deep learning. GNN methods typically have been designed on top of the graph signal processing theory. In particular, diffusion equations have been widely used for…

机器学习 · 计算机科学 2023-06-16 Jeongwhan Choi , Seoyoung Hong , Noseong Park , Sung-Bae Cho

In this work, we propose to train a graph neural network via resampling from a graphon estimate obtained from the underlying network data. More specifically, the graphon or the link probability matrix of the underlying network is first…

机器学习 · 计算机科学 2021-09-07 Ziqing Hu , Yihao Fang , Lizhen Lin

In this work, we generalize the ideas of Kaiming initialization to Graph Neural Networks (GNNs) and propose a new scheme (G-Init) that reduces oversmoothing, leading to very good results in node and graph classification tasks. GNNs are…

机器学习 · 计算机科学 2024-11-01 Dimitrios Kelesis , Dimitris Fotakis , Georgios Paliouras

The ability of message-passing neural networks (MPNNs) to fit complex functions over graphs is limited as most graph convolutions amplify the same signal across all feature channels, a phenomenon known as rank collapse, and over-smoothing…

机器学习 · 计算机科学 2024-12-10 Andreas Roth , Franka Bause , Nils M. Kriege , Thomas Liebig

Graph Neural Networks (GNNs) with equivariant properties have achieved significant success in modeling complex dynamic systems and molecular properties. However, their expressiveness ability is limited by: (1) Existing methods often…

机器学习 · 计算机科学 2025-11-04 Yingxu Wang , Nan Yin , Mingyan Xiao , Xinhao Yi , Siwei Liu , Shangsong Liang

Graph Convolutional Networks (GCNs) suffer from performance degradation when models go deeper. However, earlier works only attributed the performance degeneration to over-smoothing. In this paper, we conduct theoretical and experimental…

机器学习 · 计算机科学 2024-01-24 Weigang Lu , Yibing Zhan , Binbin Lin , Ziyu Guan , Liu Liu , Baosheng Yu , Wei Zhao , Yaming Yang , Dacheng Tao

In recent years, Graph Neural Networks (GNNs) have shown superior performance on diverse applications on real-world datasets. To improve the model capacity and alleviate the over-smoothing problem, several methods proposed to incorporate…

机器学习 · 计算机科学 2021-12-28 Lanning Wei , Huan Zhao , Zhiqiang He