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Attention-based encoder-decoder framework is widely used in the scene text recognition task. However, for the current state-of-the-art(SOTA) methods, there is room for improvement in terms of the efficient usage of local visual and global…

计算机视觉与模式识别 · 计算机科学 2021-11-16 Mengmeng Cui , Wei Wang , Jinjin Zhang , Liang Wang

This study investigates the current landscape and future directions of protein foundation model research. While recent advancements have transformed protein science and engineering, the field lacks a comprehensive benchmark for fair…

生物大分子 · 定量生物学 2025-06-19 Zhangyang Gao , Hao Wang , Cheng Tan , Chenrui Xu , Mengdi Liu , Bozhen Hu , Linlin Chao , Xiaoming Zhang , Stan Z. Li

Protein-ligand interactions are one of the fundamental types of molecular interactions in living systems. Ligands are small molecules that interact with protein molecules at specific regions on their surfaces called binding sites. Tasks…

生物大分子 · 定量生物学 2020-08-11 Arnab Bhadra , Kalidas Y

Breakthroughs in high-accuracy protein structure prediction, such as AlphaFold, have established receptor-based molecule design as a critical driver for rapid early-phase drug discovery. However, most approaches still struggle to balance…

生物大分子 · 定量生物学 2025-06-18 Dong Xu , Zhangfan Yang , Ka-chun Wong , Zexuan Zhu , Jiangqiang Li , Junkai Ji

Embodied action planning is a core challenge in robotics, requiring models to generate precise actions from visual observations and language instructions. While video generation world models are promising, their reliance on pixel-level…

计算机视觉与模式识别 · 计算机科学 2026-02-11 Yangcheng Yu , Xin Jin , Yu Shang , Xin Zhang , Haisheng Su , Wei Wu , Yong Li

Visual embedding models excel at zero-shot tasks like visual retrieval and classification. However, these models cannot be used for tasks that contain ambiguity or require user instruction. These tasks necessitate an embedding model which…

计算机视觉与模式识别 · 计算机科学 2025-08-22 Benjamin Schneider , Florian Kerschbaum , Wenhu Chen

Masked generative models (MGMs) have emerged as a powerful framework for image synthesis, combining parallel decoding with strong bidirectional context modeling. However, generating high-quality samples typically requires many iterative…

计算机视觉与模式识别 · 计算机科学 2025-05-27 Xuejie Liu , Anji Liu , Guy Van den Broeck , Yitao Liang

Networks have been widely used as the data structure for abstracting real-world systems as well as organizing the relations among entities. Network embedding models are powerful tools in mapping nodes in a network into continuous…

社会与信息网络 · 计算机科学 2019-05-28 Ninghao Liu , Qiaoyu Tan , Yuening Li , Hongxia Yang , Jingren Zhou , Xia Hu

In this and the associated article 'BioBlender: Fast and Efficient All Atom Morphing of Proteins Using Blender Game Engine', by Zini et al., we present BioBlender, a complete instrument for the elaboration of motion (Zini et al.) and the…

Proteins are macromolecules that perform essential functions in all living organisms. Designing novel proteins with specific structures and desired functions has been a long-standing challenge in the field of bioengineering. Existing…

生物大分子 · 定量生物学 2023-03-03 Chence Shi , Chuanrui Wang , Jiarui Lu , Bozitao Zhong , Jian Tang

Recent advancements in biology and chemistry have leveraged multi-modal learning, integrating molecules and their natural language descriptions to enhance drug discovery. However, current pre-training frameworks are limited to two…

机器学习 · 计算机科学 2025-02-05 Teng Xiao , Chao Cui , Huaisheng Zhu , Vasant G. Honavar

We present ReMatch, a framework that leverages the generative strength of MLLMs for multimodal retrieval. Previous approaches treated an MLLM as a simple encoder, ignoring its generative nature, and under-utilising its compositional…

计算机视觉与模式识别 · 计算机科学 2025-11-27 Qianying Liu , Xiao Liang , Zhiqiang Zhang , Zhongfei Qing , Fengfan Zhou , Yibo Chen , Xu Tang , Yao Hu , Paul Henderson

Change captioning is to use a natural language sentence to describe the fine-grained disagreement between two similar images. Viewpoint change is the most typical distractor in this task, because it changes the scale and location of the…

计算与语言 · 计算机科学 2021-10-22 Yunbin Tu , Liang Li , Chenggang Yan , Shengxiang Gao , Zhengtao Yu

Cellular function is widely believed to be organized in a modular fashion. On all scales and at all levels of complexity, relatively independent sub-units perform relatively independent sub-tasks of biological function. This functional…

分子网络 · 定量生物学 2010-12-22 Stefan Pinkert , Joerg Schultz , Joerg Reichardt

The structure and function of biological molecules are strongly influenced by the water and dissolved ions that surround them. This aqueous solution (solvent) exerts significant electrostatic forces in response to the biomolecule's…

数值分析 · 数学 2015-12-29 Matthew G. Knepley , Jaydeep P. Bardhan

Proteins play crucial roles in almost all biological processes. The advancement of deep learning has greatly accelerated the development of protein foundation models, leading to significant successes in protein understanding and design.…

机器学习 · 计算机科学 2025-10-09 Jigang Fan , Zhenghong Zhou , Ruofan Jin , Le Cong , Mengdi Wang , Zaixi Zhang

Enzymes, with their specific catalyzed reactions, are necessary for all aspects of life, enabling diverse biological processes and adaptations. Predicting enzyme functions is essential for understanding biological pathways, guiding drug…

机器学习 · 计算机科学 2024-10-02 Chenqing Hua , Bozitao Zhong , Sitao Luan , Liang Hong , Guy Wolf , Doina Precup , Shuangjia Zheng

Task embedding, a meta-learning technique that captures task-specific information, has gained popularity, especially in areas such as multi-task learning, model editing, and interpretability. However, it faces challenges with the emergence…

计算与语言 · 计算机科学 2024-07-15 Xinyu Wang , Hainiu Xu , Lin Gui , Yulan He

Palmprint recognition is widely used in biometric systems, yet real-world performance often degrades due to feature distribution shifts caused by heterogeneous deployment conditions. Most deep palmprint models assume a closed and stationary…

计算机视觉与模式识别 · 计算机科学 2026-01-29 Chenke Zhang , Ziyuan Yang , Licheng Yan , Shuyi Li , Andrew Beng Jin Teoh , Bob Zhang , Yi Zhang

Continuously estimating an agent's state space and a representation of its surroundings has proven vital towards full autonomy. A shared common ground among systems which successfully achieve this feat is the integration of previously…

计算机视觉与模式识别 · 计算机科学 2019-08-05 Gil Avraham , Yan Zuo , Thanuja Dharmasiri , Tom Drummond