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1. Species distribution models (SDM) are tools used to determine environmental features that influence the geographic distribution of species' abundance and have been used to analyze presence-only records. Analysis of presence-only records…

种群与进化 · 定量生物学 2013-12-05 Trevor Hefley , Andrew Tyre , David Baasch , Erin Blankenship

Understanding how species are distributed across landscapes over time is a fundamental question in biodiversity research. Unfortunately, most species distribution models only target a single species at a time, despite strong ecological…

机器学习 · 计算机科学 2017-02-22 Di Chen , Yexiang Xue , Shuo Chen , Daniel Fink , Carla Gomes

We discuss species distribution models (SDM) for biodiversity studies in ecology. SDM plays an important role to estimate abundance of a species based on environmental variables that are closely related with the habitat of the species. The…

应用统计 · 统计学 2023-05-01 Osamu Komori , Yusuke Saigusa , Shinto Eguchi

Maximum entropy (MAXENT) method has a large number of applications in theoretical and applied machine learning, since it provides a convenient non-parametric tool for estimating unknown probabilities. The method is a major contribution of…

数据分析、统计与概率 · 物理学 2020-12-18 A. E. Allahverdyan , N. H. Martirosyan

Maximum entropy principle (MEP) offers an effective and unbiased approach to inferring unknown probability distributions when faced with incomplete information, while neural networks provide the flexibility to learn complex distributions…

机器学习 · 统计学 2024-12-04 Wuyue Yang , Liangrong Peng , Guojie Li , Liu Hong

Species distribution modeling is a highly versatile tool for understanding the intricate relationship between environmental conditions and species occurrences. However, the available data often lacks information on confirmed species absence…

定量方法 · 定量生物学 2024-06-18 Robin Zbinden , Nina van Tiel , Benjamin Kellenberger , Lloyd Hughes , Devis Tuia

Species distribution models (SDMs), which aim to predict species occurrence based on environmental variables, are widely used to monitor and respond to biodiversity change. Recent deep learning advances for SDMs have been shown to perform…

机器学习 · 计算机科学 2025-11-14 Catherine Villeneuve , Benjamin Akera , Mélisande Teng , David Rolnick

Maximum entropy (Maxent) models are a class of statistical models that use the maximum entropy principle to estimate probability distributions from data. Due to the size of modern data sets, Maxent models need efficient optimization…

机器学习 · 统计学 2024-03-12 Gabriel P. Langlois , Jatan Buch , Jérôme Darbon

In the face of significant biodiversity decline, species distribution models (SDMs) are essential for understanding the impact of climate change on species habitats by connecting environmental conditions to species occurrences.…

机器学习 · 计算机科学 2024-03-13 Robin Zbinden , Nina van Tiel , Marc Rußwurm , Devis Tuia

The principle of maximum entropy (Maxent) is often used to obtain prior probability distributions as a method to obtain a Gibbs measure under some restriction giving the probability that a system will be in a certain state compared to the…

信息论 · 计算机科学 2019-06-26 Hector Zenil , Narsis A. Kiani , Jesper Tegnér

Recent work in data mining and related areas has highlighted the importance of the statistical assessment of data mining results. Crucial to this endeavour is the choice of a non-trivial null model for the data, to which the found patterns…

人工智能 · 计算机科学 2009-06-30 Tijl De Bie

This paper focuses on a core task in computational sustainability and statistical ecology: species distribution modeling (SDM). In SDM, the occurrence pattern of a species on a landscape is predicted by environmental features based on…

Inferring the input parameters of simulators from observations is a crucial challenge with applications from epidemiology to molecular dynamics. Here we show a simple approach in the regime of sparse data and approximately correct models,…

统计方法学 · 统计学 2022-04-06 Rainier Barrett , Mehrad Ansari , Gourab Ghoshal , Andrew D White

Species distribution modeling plays an important role in estimating the habitat suitability of species using environmental variables. For this purpose, Maxent and the Poisson point process are popular and powerful methods extensively…

统计方法学 · 统计学 2024-05-24 Osamu Komori , Yusuke Saigusa , Shinto Eguchi , Yasuhiro Kubota

The post-2020 global biodiversity framework needs ambitious, research-based targets. Estimating the accelerated extinction risk due to climate change is critical. The International Union for Conservation of Nature (IUCN) measures the…

种群与进化 · 定量生物学 2024-01-12 Joaquim Estopinan , Pierre Bonnet , Maximilien Servajean , François Munoz , Alexis Joly

In most data-scientific approaches, the principle of Maximum Entropy (MaxEnt) is used to a posteriori justify some parametric model which has been already chosen based on experience, prior knowledge or computational simplicity. In a…

统计方法学 · 统计学 2022-06-29 Orestis Loukas , Ho Ryun Chung

Monitoring species distribution is vital for conservation efforts, enabling the assessment of environmental impacts and the development of effective preservation strategies. Traditional data collection methods, including citizen science,…

机器学习 · 计算机科学 2025-10-23 Chirag Padubidri , Pranesh Velmurugan , Andreas Lanitis , Andreas Kamilaris

Species distribution modeling (SDM) plays a crucial role in investigating habitat suitability and addressing various ecological issues. While likelihood analysis is commonly used to draw ecological conclusions, it has been observed that its…

统计方法学 · 统计学 2023-07-03 Yusuke Saigusa , Shinto Eguchi , Osamu Komori

Many disciplines need quantitative models that synthesize experimental data across multiple instances of the same general system. For example, neuroscientists must combine data from the brains of many individual animals to understand the…

机器学习 · 计算机科学 2026-03-17 William E. Bishop , Luuk W. Hesselink , Bernhard Englitz , Misha B. Ahrens , James E. Fitzgerald

The limits of molecular dynamics (MD) simulations of macromolecules are steadily pushed forward by the relentless developments of computer architectures and algorithms. This explosion in the number and extent (in size and time) of MD…

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